A single-cell transcriptomic map of the human and mouse pancreas reveals inter-and intra-cell population structure M Baron, A Veres, SL Wolock, AL Faust, R Gaujoux, A Vetere, JH Ryu, ... Cell systems 3 (4), 346-360. e4, 2016 | 1266 | 2016 |
Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas M Reuben, B Dalia, W Florian, C Marta, CD Joseph, B Maayan, ... Nature Biotechnology, 2020 | 690 | 2020 |
Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment D Barkley, R Moncada, M Pour, DA Liberman, I Dryg, G Werba, W Wang, ... Nature genetics 54 (8), 1192-1201, 2022 | 169 | 2022 |
Widespread Transcriptional Scanning in the Testis Modulates Gene Evolution Rates X Bo, Y Yun, B Maayan, W Florian, B Dalia, C Marta, YK Sang, LK David, ... Cell 180 (2), 248-262.e21, 2020 | 153 | 2020 |
The stress-like cancer cell state is a consistent component of tumorigenesis M Baron, M Tagore, MV Hunter, IS Kim, R Moncada, Y Yan, NR Campbell, ... Cell systems 11 (5), 536-546. e7, 2020 | 72 | 2020 |
Cooperation between melanoma cell states promotes metastasis through heterotypic cluster formation NR Campbell, A Rao, MV Hunter, MK Sznurkowska, L Briker, M Zhang, ... Developmental cell 56 (20), 2808-2825. e10, 2021 | 49 | 2021 |
A Generalist Protist Predator Enables Coexistence in Multitrophic Predator-Prey Systems Containing a Phage and the Bacterial Predator Bdellovibrio J Johnke, M Baron, M De Leeuw, A Kushmaro, E Jurkevitch, H Harms, ... Frontiers in Ecology and Evolution 5, 124, 2017 | 39 | 2017 |
Phylogenetic debugging of a complete human biosynthetic pathway transplanted into yeast N Agmon, J Temple, Z Tang, T Schraink, M Baron, J Chen, P Mita, ... Nucleic acids research 48 (1), 486-499, 2020 | 28* | 2020 |
Molecular insights into bacteriophage evolution toward its host M de Leeuw, M Baron, O Ben David, A Kushmaro Viruses 12 (10), 1132, 2020 | 16 | 2020 |
Cellular adaptation to cancer therapy along a resistance continuum GS França, M Baron, BR King, JP Bossowski, A Bjornberg, M Pour, A Rao, ... Nature, 1-8, 2024 | 14* | 2024 |
Genome analysis of a novel broad host range Proteobacteria phage isolated from a bioreactor treating industrial wastewater M De Leeuw, M Baron, A Brenner, A Kushmaro Genes 8 (1), 40, 2017 | 14 | 2017 |
GABA regulates electrical activity and tumor initiation in melanoma M Tagore, E Hergenreder, SC Perlee, NM Cruz, L Menocal, S Suresh, ... Cancer Discovery 13 (10), 2270-2291, 2023 | 13* | 2023 |
New skin for the old RNA-Seq ceremony: the age of single-cell multi-omics M Baron, I Yanai Genome Biology 18, 1-3, 2017 | 11 | 2017 |
Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma NR Campbell, A Rao, M Zhang, M Baron, S Heilmann, M Deforet, ... bioRxiv, 2020.08. 24.265140, 2020 | 5 | 2020 |
It's about time: studying gene regulatory programs across serial organs M Baron, I Yanai Genome Biology 18, 1-3, 2017 | 1 | 2017 |
Evaluation of a novel signature for PARP inhibitor sensitivity prediction using real-world data. E Vucic, F Kuperwaser, S Kumar, D Tracy, O Marchenko, Z Miao, J Kaffey, ... Journal of Clinical Oncology 42 (16_suppl), 5583-5583, 2024 | | 2024 |
Reconstructing a latent representation of gene expression from genomic alterations to improve clinical utility of real-world clinicogenomics data M Baron, S Kumar, F Kuperwaser, D Tracy, E Vucic, J Sherman Cancer Research 84 (6_Supplement), 3519-3519, 2024 | | 2024 |
Generative Bayesian networks for augmentation of molecular data from commercial genetics panels DH Tracy, J Sherman, M Baron Cancer Research 84 (6_Supplement), 7373-7373, 2024 | | 2024 |
1295 Integrating drug structure and target binding affinity for improved prediction of survival in cancer patients treated with immune checkpoint inhibitors S Kumar, F Kuperwaser, D Tracy, J Sherman, A Chursov, E Vucic, ... Journal for ImmunoTherapy of Cancer 11 (Suppl 1), 2023 | | 2023 |
1296 Reconstructing gene expression from clinical and genetic panel data for predictions of tumor microenvironment features and response to immune checkpoint inhibitor therapy F Kuperwaser, S Kumar, D Tracy, J Sherman, A Chursov, M Baron, ... Journal for ImmunoTherapy of Cancer 11 (Suppl 1), 2023 | | 2023 |