| Babelomics 5.0: functional interpretation for new generations of genomic data R Alonso, F Salavert, F Garcia-Garcia, J Carbonell-Caballero, M Bleda, ... Nucleic acids research 43 (W1), W117-W121, 2015 | 140 | 2015 |
| High throughput estimation of functional cell activities reveals disease mechanisms and predicts relevant clinical outcomes MR Hidalgo, C Cubuk, A Amadoz, F Salavert, J Carbonell-Caballero, ... Oncotarget 8 (3), 5160, 2017 | 90 | 2017 |
| Understanding disease mechanisms with models of signaling pathway activities P Sebastian-Leon, E Vidal, P Minguez, A Conesa, S Tarazona, A Amadoz, ... BMC systems biology 8, 1-19, 2014 | 61 | 2014 |
| A web-based interactive framework to assist in the prioritization of disease candidate genes in whole-exome sequencing studies A Alemán, F Garcia-Garcia, F Salavert, I Medina, J Dopazo Nucleic acids research 42 (W1), W88-W93, 2014 | 59 | 2014 |
| VARIANT: Command Line, Web service and Web interface for fast and accurate functional characterization of variants found by Next-Generation Sequencing I Medina, A De Maria, M Bleda, F Salavert, R Alonso, CY Gonzalez, ... Nucleic acids research 40 (W1), W54-W58, 2012 | 55 | 2012 |
| CellBase, a comprehensive collection of RESTful web services for retrieving relevant biological information from heterogeneous sources M Bleda, J Tarraga, A De María, F Salavert, L Garcia-Alonso, M Celma, ... Nucleic acids research 40 (W1), W609-W614, 2012 | 48 | 2012 |
| Using activation status of signaling pathways as mechanism-based biomarkers to predict drug sensitivity A Amadoz, P Sebastian-Leon, E Vidal, F Salavert, J Dopazo Scientific reports 5 (1), 18494, 2015 | 46 | 2015 |
| Genome Maps, a new generation genome browser I Medina, F Salavert, R Sanchez, A de Maria, R Alonso, P Escobar, ... Nucleic acids research 41 (W1), W41-W46, 2013 | 41 | 2013 |
| Differential metabolic activity and discovery of therapeutic targets using summarized metabolic pathway models C Çubuk, MR Hidalgo, A Amadoz, K Rian, F Salavert, MA Pujana, ... NPJ systems biology and applications 5 (1), 7, 2019 | 34 | 2019 |
| Actionable pathways: interactive discovery of therapeutic targets using signaling pathway models F Salavert, MR Hidago, A Amadoz, C Cubuk, I Medina, D Crespo, ... Nucleic acids research 44 (W1), W212-W216, 2016 | 33 | 2016 |
| Inferring the functional effect of gene expression changes in signaling pathways P Sebastian-Leon, J Carbonell, F Salavert, R Sanchez, I Medina, ... Nucleic Acids Research 41 (W1), W213-W217, 2013 | 30 | 2013 |
| Community assessment of the predictability of cancer protein and phosphoprotein levels from genomics and transcriptomics M Yang, F Petralia, Z Li, H Li, W Ma, X Song, S Kim, H Lee, H Yu, B Lee, ... Cell systems 11 (2), 186-195. e9, 2020 | 24 | 2020 |
| Web-based network analysis and visualization using CellMaps F Salavert, L García-Alonso, R Sánchez, R Alonso, M Bleda, I Medina, ... Bioinformatics 32 (19), 3041-3043, 2016 | 20 | 2016 |
| Assessing the impact of mutations found in next generation sequencing data over human signaling pathways RD Hernansaiz-Ballesteros, F Salavert, P Sebastián-León, A Alemán, ... Nucleic Acids Research 43 (W1), W270-W275, 2015 | 17 | 2015 |
| Inferring the regulatory network behind a gene expression experiment M Bleda, I Medina, R Alonso, A De Maria, F Salavert, J Dopazo Nucleic acids research 40 (W1), W168-W172, 2012 | 12 | 2012 |
| Multicore and cloud-based solutions for genomic variant analysis CY González, M Bleda, F Salavert, R Sánchez, J Dopazo, I Medina Euro-Par 2012: Parallel Processing Workshops: BDMC, CGWS, HeteroPar, HiBB …, 2013 | 3 | 2013 |
| BiER collaborative projects F García-García, A Alemán, F Salavert, M Medina, J Mendieta, J Dopazo | | |
| RENATO: Inferring the regulatory network behind a gene expression experiment M Bleda, I Medina, R Alonso, A De María, F Salavert, J Dopazo | | |
