| Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing PM Shih, D Wu, A Latifi, SD Axen, DP Fewer, E Talla, A Calteau, F Cai, ... Proceedings of the National Academy of Sciences 110 (3), 1053-1058, 2013 | 843 | 2013 |
| Direct Identification of the Meloidogyne incognita Secretome Reveals Proteins with Host Cell Reprogramming Potential S Bellafiore, Z Shen, MN Rosso, P Abad, P Shih, SP Briggs PLoS pathogens 4 (10), e1000192, 2008 | 316 | 2008 |
| Standards for plant synthetic biology: a common syntax for exchange of DNA parts NJ Patron, D Orzaez, S Marillonnet, H Warzecha, C Matthewman, ... New Phytologist 208 (1), 13-19, 2015 | 294 | 2015 |
| Dynamic cyanobacterial response to hydration and dehydration in a desert biological soil crust L Rajeev, UN Da Rocha, N Klitgord, EG Luning, J Fortney, SD Axen, ... The ISME journal 7 (11), 2178-2191, 2013 | 251 | 2013 |
| Precise age of Bangiomorpha pubescens dates the origin of eukaryotic photosynthesis TM Gibson, PM Shih, VM Cumming, WW Fischer, PW Crockford, ... Geology 46 (2), 135-138, 2018 | 191 | 2018 |
| Crown group Oxyphotobacteria postdate the rise of oxygen PM Shih, J Hemp, LM Ward, NJ Matzke, WW Fischer Geobiology 15 (1), 19-29, 2017 | 159 | 2017 |
| Primary endosymbiosis events date to the later Proterozoic with cross-calibrated phylogenetic dating of duplicated ATPase proteins PM Shih, NJ Matzke Proceedings of the National Academy of Sciences 110 (30), 12355-12360, 2013 | 140 | 2013 |
| Biochemical characterization of predicted Precambrian RuBisCO PM Shih, A Occhialini, JC Cameron, PJ Andralojc, MAJ Parry, CA Kerfeld Nature Communications 7 (1), 10382, 2016 | 136 | 2016 |
| Evolution of phototrophy in the Chloroflexi phylum driven by horizontal gene transfer LM Ward, J Hemp, PM Shih, SE McGlynn, WW Fischer Frontiers in microbiology 9, 260, 2018 | 128 | 2018 |
| Introduction of a synthetic CO2-fixing photorespiratory bypass into a cyanobacterium PM Shih, J Zarzycki, KK Niyogi, CA Kerfeld Journal of Biological Chemistry 289 (14), 9493-9500, 2014 | 123 | 2014 |
| CRISPR–Act3. 0 for highly efficient multiplexed gene activation in plants C Pan, X Wu, K Markel, AA Malzahn, N Kundagrami, S Sretenovic, ... Nature Plants 7 (7), 942-953, 2021 | 119 | 2021 |
| Evolution of the 3-hydroxypropionate bicycle and recent transfer of anoxygenic photosynthesis into the Chloroflexi PM Shih, LM Ward, WW Fischer Proceedings of the National Academy of Sciences 114 (40), 10749-10754, 2017 | 99 | 2017 |
| Bacterial diversification through geological time S Louca, PM Shih, MW Pennell, WW Fischer, LW Parfrey, M Doebeli Nature ecology & evolution 2 (9), 1458-1467, 2018 | 83 | 2018 |
| Accumulation of high-value bioproducts in planta can improve the economics of advanced biofuels M Yang, NR Baral, BA Simmons, JC Mortimer, PM Shih, CD Scown Proceedings of the National Academy of Sciences 117 (15), 8639-8648, 2020 | 71 | 2020 |
| Design of orthogonal regulatory systems for modulating gene expression in plants MS Belcher, KM Vuu, A Zhou, N Mansoori, A Agosto Ramos, ... Nature chemical biology 16 (8), 857-865, 2020 | 70 | 2020 |
| A robust gene-stacking method utilizing yeast assembly for plant synthetic biology PM Shih, K Vuu, N Mansoori, L Ayad, KB Louie, BP Bowen, TR Northen, ... Nature communications 7 (1), 13215, 2016 | 69 | 2016 |
| Novel bacterial clade reveals origin of form I Rubisco DM Banda, JH Pereira, AK Liu, DJ Orr, M Hammel, C He, MAJ Parry, ... Nature plants 6 (9), 1158-1166, 2020 | 64 | 2020 |
| Fatty acid and alcohol metabolism in Pseudomonas putida: functional analysis using random barcode transposon sequencing MG Thompson, MR Incha, AN Pearson, M Schmidt, WA Sharpless, ... Applied and environmental microbiology 86 (21), e01665-20, 2020 | 60 | 2020 |
| Biotechnology and synthetic biology approaches for metabolic engineering of bioenergy crops PM Shih, Y Liang, D Loque The Plant Journal 87 (1), 103-117, 2016 | 57 | 2016 |
| Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria PB Matheus Carnevali, F Schulz, CJ Castelle, RS Kantor, PM Shih, ... Nature communications 10 (1), 463, 2019 | 56 | 2019 |
