Dissecting the sharp response of a canonical developmental enhancer reveals multiple sources of cooperativity J Park, J Estrada, G Johnson, BJ Vincent, C Ricci-Tam, MDJ Bragdon, ... Elife 8, e41266, 2019 | 62 | 2019 |
A computational screen for alternative genetic codes in over 250,000 genomes Y Shulgina, S Eddy eLife 10, e71402, 2021 | 40 | 2021 |
Idiosyncratic epistasis leads to global fitness–correlated trends CW Bakerlee, AN Nguyen Ba, Y Shulgina, JI Rojas Echenique, MM Desai Science 376 (6593), 630-635, 2022 | 39 | 2022 |
Synthetic genome recoding: new genetic codes for new features J Kuo, F Stirling, YH Lau, Y Shulgina, JC Way, PA Silver Current genetics 64, 327-333, 2018 | 23 | 2018 |
Codetta: predicting the genetic code from nucleotide sequence Y Shulgina, SR Eddy Bioinformatics 39 (1), btac802, 2023 | 6 | 2023 |
RNA language models predict mutations that improve RNA function Y Shulgina, MI Trinidad, CJ Langeberg, H Nisonoff, S Chithrananda, ... bioRxiv, 2024 | | 2024 |
How did UGA codon translation as tryptophan evolve in certain ciliates? A critique of Kachale et al. 2023 Nature EC Swart, C Emmerich, KBB Seah, M Singh, Y Shulgina, A Singh bioRxiv, 2023.10. 09.561518, 2023 | | 2023 |
The Evolution of Alternative Genetic Codes Y Shulgina Harvard University, 2022 | | 2022 |