| Recent advances in T-cell receptor repertoire analysis: bridging the gap with multimodal single-cell RNA sequencing S Valkiers, N de Vrij, S Gielis, S Verbandt, B Ogunjimi, K Laukens, ... ImmunoInformatics 5, 100009, 2022 | 50 | 2022 |
| ClusTCR: a python interface for rapid clustering of large sets of CDR3 sequences with unknown antigen specificity S Valkiers, M Van Houcke, K Laukens, P Meysman Bioinformatics 37 (24), 4865-4867, 2021 | 50 | 2021 |
| Current annotation strategies for T cell phenotyping of single-cell RNA-seq data KA Mullan, N de Vrij, S Valkiers, P Meysman Frontiers in Immunology 14, 1306169, 2023 | 8 | 2023 |
| Lessons learned from the IMMREP23 TCR-epitope prediction challenge M Nielsen, A Eugster, MF Jensen, M Goel, A Tiffeau-Mayer, A Pelissier, ... ImmunoInformatics 16, 100045, 2024 | 7 | 2024 |
| Lack of functional TCR-epitope interaction is associated with herpes zoster through reduced downstream T cell activation M Boeren, N de Vrij, MK Ha, S Valkiers, A Souquette, S Gielis, ... Cell reports 43 (4), 2024 | 3 | 2024 |
| STEGO. R: an application to aid in scRNA-seq and scTCR-seq processing and analysis KA Mullan, M Ha, S Valkiers, B Ogunjimi, K Laukens, P Meysman bioRxiv, 2023.09. 27.559702, 2023 | 2 | 2023 |
| T cell receptor–centric perspective to multimodal single-cell data analysis KA Mullan, M Ha, S Valkiers, N de Vrij, B Ogunjimi, K Laukens, ... Science Advances 10 (48), eadr3196, 2024 | | 2024 |
| Identification of a type 1 diabetes-associated T cell receptor repertoire signature from the human peripheral blood P Rawat, MR Shapiro, LD Peters, M Widrich, K Mayer-Blackwell, ... medRxiv, 2024.12. 10.24318751, 2024 | | 2024 |
| Linking myelin and Epstein-Barr virus specific immune responses in multiple sclerosis: insights from integrated public T cell receptor repertoires S Valkiers, A Dams, M Kuznetsova, M Ha, B Willekens, K Laukens, ... bioRxiv, 2024.10. 23.619834, 2024 | | 2024 |
| Revealing the hidden sequence distribution of epitope-specific TCR repertoires and its influence on machine learning model performance S Gielis, M Chernigovskaya, M Pavlovic, V Van Deuren, R Vandoren, ... bioRxiv, 2024.10. 21.619364, 2024 | | 2024 |
| RapTCR: Rapid exploration and visualization of T-cell receptor repertoires VML Van Deuren, S Valkiers, K Laukens, P Meysman bioRxiv, 2023.09. 13.557604, 2023 | | 2023 |
| Clustering and Annotation of T Cell Receptor Repertoires S Valkiers, S Gielis, VML Van Deuren, K Laukens, P Meysman Computational Vaccine Design, 33-51, 2023 | | 2023 |
| Where Single-Cell Transcriptomics Fails T Cells: The Misuse of Unsupervised Clustering for T-Cell Annotation KA Mullan, S Valkiers, N de Vrij, C Li, S Verbandt, T Pu, P Meysman Available at SSRN 5000768, 0 | | |
Pieter MeysmanAssociate professor, University of Antwerp在 uantwerpen.be 的电子邮件经过验证
Pieter MeysmanAssociate professor, University of Antwerp在 uantwerpen.be 的电子邮件经过验证
Kris LaukensProfessor Biodata Mining & Bioinformatics, University of Antwerp在 uantwerpen.be 的电子邮件经过验证