| Spatiotemporal dissection of the cell cycle with single-cell proteogenomics D Mahdessian, AJ Cesnik, C Gnann, F Danielsson, L Stenström, M Arif, ... Nature 590 (7847), 649-654, 2021 | 128 | 2021 |
| Mapping the nucleolar proteome reveals a spatiotemporal organization related to intrinsic protein disorder L Stenström, D Mahdessian, C Gnann, AJ Cesnik, W Ouyang, ... Molecular Systems Biology 16 (8), e9469, 2020 | 120 | 2020 |
| Proteogenomics: integrating next-generation sequencing and mass spectrometry to characterize human proteomic variation GM Sheynkman, MR Shortreed, AJ Cesnik, LM Smith Annual review of analytical chemistry 9, 521-545, 2016 | 116 | 2016 |
| Analysis of the human protein atlas image classification competition W Ouyang, CF Winsnes, M Hjelmare, AJ Cesnik, L Åkesson, H Xu, ... Nature methods 16 (12), 1254-1261, 2019 | 113 | 2019 |
| The Blood Proteoform Atlas: A reference map of proteoforms in human hematopoietic cells RD Melani, VR Gerbasi, LC Anderson, JW Sikora, TK Toby, JE Hutton, ... Science 375 (6579), 411-418, 2022 | 80 | 2022 |
| HyPR-MS for multiplexed discovery of MALAT1, NEAT1, and NORAD lncRNA protein interactomes M Spiniello, RA Knoener, MI Steinbrink, B Yang, AJ Cesnik, KE Buxton, ... Journal of proteome research 17 (9), 3022-3038, 2018 | 57 | 2018 |
| ProForma: a standard proteoform notation RD LeDuc, V Schwämmle, MR Shortreed, AJ Cesnik, SK Solntsev, ... Journal of proteome research 17 (3), 1321-1325, 2018 | 53 | 2018 |
| Elucidating proteoform families from proteoform intact-mass and lysine-count measurements MR Shortreed, BL Frey, M Scalf, RA Knoener, AJ Cesnik, LM Smith Journal of proteome research 15 (4), 1213-1221, 2016 | 50 | 2016 |
| Proteoform Suite: Software for constructing, quantifying, and visualizing proteoform families AJ Cesnik, MR Shortreed, LV Schaffer, RA Knoener, BL Frey, M Scalf, ... Journal of proteome research 17 (1), 568-578, 2018 | 46 | 2018 |
| Elucidating Escherichia coli Proteoform Families Using Intact-Mass Proteomics and a Global PTM Discovery Database Y Dai, MR Shortreed, M Scalf, BL Frey, AJ Cesnik, S Solntsev, LV Schaffer, ... Journal of proteome research 16 (11), 4156-4165, 2017 | 36 | 2017 |
| Human proteomic variation revealed by combining RNA-Seq proteogenomics and global post-translational modification (G-PTM) search strategy AJ Cesnik, MR Shortreed, GM Sheynkman, BL Frey, LM Smith Journal of proteome research 15 (3), 800-808, 2016 | 36 | 2016 |
| Spritz: a proteogenomic database engine AJ Cesnik, RM Miller, K Ibrahim, L Lu, RJ Millikin, MR Shortreed, BL Frey, ... Journal of proteome research 20 (4), 1826-1834, 2020 | 31 | 2020 |
| Identification and quantification of murine mitochondrial proteoforms using an integrated top-down and intact-mass strategy LV Schaffer, JW Rensvold, MR Shortreed, AJ Cesnik, A Jochem, M Scalf, ... Journal of proteome research 17 (10), 3526-3536, 2018 | 30 | 2018 |
| Expanding proteoform identifications in top-down proteomic analyses by constructing proteoform families LV Schaffer, MR Shortreed, AJ Cesnik, BL Frey, SK Solntsev, M Scalf, ... Analytical chemistry 90 (2), 1325-1333, 2018 | 29 | 2018 |
| Comprehensive in vivo identification of the c-Myc mRNA protein interactome using HyPR-MS M Spiniello, MI Steinbrink, AJ Cesnik, RM Miller, M Scalf, MR Shortreed, ... RNA 25 (10), 1337-1352, 2019 | 20 | 2019 |
| Electrochemical Synthesis of Binary and Ternary Niobium-Containing Oxide Electrodes Using the p-Benzoquinone/Hydroquinone Redox Couple CM Papa, AJ Cesnik, TC Evans, KS Choi Langmuir 31 (34), 9502-9510, 2015 | 19 | 2015 |
| Proteomics in non-human primates: utilizing RNA-Seq data to improve protein identification by mass spectrometry in vervet monkeys JM Proffitt, J Glenn, AJ Cesnik, A Jadhav, MR Shortreed, LM Smith, ... BMC genomics 18, 1-10, 2017 | 17 | 2017 |
| Bento: a toolkit for subcellular analysis of spatial transcriptomics data CK Mah, N Ahmed, NA Lopez, DC Lam, A Pong, A Monell, C Kern, Y Han, ... Genome Biology 25 (1), 82, 2024 | 16 | 2024 |
| Proteomics Standards Initiative’s ProForma 2.0: Unifying the encoding of proteoforms and peptidoforms RD LeDuc, EW Deutsch, PA Binz, RT Fellers, AJ Cesnik, JA Klein, ... Journal of proteome research 21 (4), 1189-1195, 2022 | 16 | 2022 |
| Illuminating non-genetic cellular heterogeneity with imaging-based spatial proteomics C Gnann, AJ Cesnik, E Lundberg Trends in cancer 7 (4), 278-282, 2021 | 16 | 2021 |
Michael ShortreedSenior Scientist, University of Wisconsin在 chem.wisc.edu 的电子邮件经过验证
