| Applying a multiobjective metaheuristic inspired by honey bees to phylogenetic inference S Santander-Jiménez, MA Vega-Rodríguez Biosystems 114 (1), 39-55, 2013 | 24 | 2013 |
| Parallel multiobjective metaheuristics for inferring phylogenies on multicore clusters S Santander-Jimenez, MA Vega-Rodriguez IEEE Transactions on Parallel and Distributed Systems 26 (6), 1678-1692, 2014 | 19 | 2014 |
| Performance evaluation of dominance-based and indicator-based multiobjective approaches for phylogenetic inference S Santander-Jiménez, MA Vega-Rodriguez Information Sciences 330, 293-314, 2016 | 17 | 2016 |
| A multiobjective proposal based on the firefly algorithm for inferring phylogenies S Santander-Jiménez, MA Vega-Rodríguez Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics …, 2013 | 17 | 2013 |
| Exploring the binary precision capabilities of tensor cores for epistasis detection R Nobre, A Ilic, S Santander-Jiménez, L Sousa 2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2020 | 16 | 2020 |
| A hybrid approach to parallelize a fast non‐dominated sorting genetic algorithm for phylogenetic inference S Santander‐Jiménez, MA Vega‐Rodríguez Concurrency and Computation: Practice and Experience 27 (3), 702-734, 2015 | 16 | 2015 |
| Multiobjective frog-leaping optimization for the study of ancestral relationships in protein data S Santander-Jiménez, MA Vega-Rodríguez, L Sousa IEEE Transactions on Evolutionary Computation 22 (6), 879-893, 2017 | 13 | 2017 |
| Retargeting tensor accelerators for epistasis detection R Nobre, A Ilic, S Santander-Jiménez, L Sousa IEEE Transactions on Parallel and Distributed Systems 32 (9), 2160-2174, 2021 | 11 | 2021 |
| Accelerating 3-way epistasis detection with CPU+ GPU processing R Nobre, S Santander-Jiménez, L Sousa, A Ilic Workshop on job scheduling strategies for parallel processing, 106-126, 2020 | 11 | 2020 |
| Multi-objective artificial bee colony for designing multiple genes encoding the same protein B Gonzalez-Sanchez, MA Vega-Rodríguez, S Santander-Jiménez, ... Applied Soft Computing 74, 90-98, 2019 | 11 | 2019 |
| Asynchronous non-generational model to parallelize metaheuristics: a bioinformatics case study S Santander-Jiménez, MA Vega-Rodríguez IEEE Transactions on Parallel and Distributed Systems 28 (7), 1825-1838, 2016 | 11 | 2016 |
| On the design of shared memory approaches to parallelize a multiobjective bee-inspired proposal for phylogenetic reconstruction S Santander-Jimenez, MA Vega-Rodriguez Information Sciences 324, 163-185, 2015 | 9 | 2015 |
| Inferring multiobjective phylogenetic hypotheses by using a parallel indicator-based evolutionary algorithm S Santander-Jiménez, MA Vega-Rodríguez Theory and Practice of Natural Computing: Third International Conference …, 2014 | 9 | 2014 |
| Fourth-order exhaustive epistasis detection for the xPU Era R Nobre, A Ilic, S Santander-Jiménez, L Sousa Proceedings of the 50th International Conference on Parallel Processing, 1-10, 2021 | 8 | 2021 |
| HEDAcc: FPGA-based accelerator for high-order epistasis detection G Ribeiro, N Neves, S Santander-Jiménez, A Ilic 2021 IEEE 29th Annual International Symposium on Field-Programmable Custom …, 2021 | 7 | 2021 |
| Multi-objective memetic meta-heuristic algorithm for encoding the same protein with multiple genes B Gonzalez-Sanchez, MA Vega-Rodriguez, S Santander-Jimenez Expert Systems with Applications 136, 83-93, 2019 | 7 | 2019 |
| Comparative analysis of intra-algorithm parallel multiobjective evolutionary algorithms: Taxonomy implications on bioinformatics scenarios S Santander-Jimenez, MA Vega-Rodriguez IEEE Transactions on Parallel and Distributed Systems 30 (1), 63-78, 2018 | 7 | 2018 |
| A multi-objective butterfly optimization algorithm for protein encoding B Gonzalez-Sanchez, MA Vega-Rodríguez, S Santander-Jiménez Applied Soft Computing 139, 110269, 2023 | 6 | 2023 |
| Heterogeneous CPU+ iGPU processing for efficient epistasis detection R Campos, D Marques, S Santander-Jiménez, L Sousa, A Ilic European conference on parallel processing, 613-628, 2020 | 6 | 2020 |
| Parallel computing in bioinformatics: a view from high-performance, heterogeneous, and cloud computing MA Vega-Rodríguez, S Santander-Jiménez The Journal of Supercomputing 75, 3369-3373, 2019 | 6 | 2019 |
