RNA-GPS predicts SARS-CoV-2 RNA residency to host mitochondria and nucleolus KE Wu, FM Fazal, KR Parker, J Zou, HY Chang Cell systems 11 (1), 102-108. e3, 2020 | 145 | 2020 |
Protein structure generation via folding diffusion KE Wu, KK Yang, R van den Berg, S Alamdari, JY Zou, AX Lu, AP Amini Nature Communications 15 (1), 1059, 2024 | 123 | 2024 |
BABEL enables cross-modality translation between multiomic profiles at single-cell resolution KE Wu, KE Yost, HY Chang, J Zou Proceedings of the National Academy of Sciences 118 (15), e2023070118, 2021 | 96 | 2021 |
TCR-BERT: learning the grammar of T-cell receptors for flexible antigen-binding analyses KE Wu, K Yost, B Daniel, J Belk, Y Xia, T Egawa, A Satpathy, H Chang, ... Machine Learning in Computational Biology, 194-229, 2024 | 45 | 2024 |
Methods and systems for generation and error-correction of unique molecular index sets with heterogeneous molecular lengths K Wu, C Zhao, HY Chuang, A So, S Tanner, SM Gross US Patent 10,844,429, 2020 | 24 | 2020 |
RNA-GPS predicts high-resolution RNA subcellular localization and highlights the role of splicing KE Wu, KR Parker, FM Fazal, HY Chang, J Zou RNA 26 (7), 851-865, 2020 | 14 | 2020 |
Machine learning modeling of RNA structures: methods, challenges and future perspectives KE Wu, JY Zou, H Chang Briefings in Bioinformatics 24 (4), bbad210, 2023 | 6 | 2023 |
Universal short adapters with variable length non-random unique molecular identifiers C Zhao, K Wu, HY Chuang, J Lococo, A So, D Baker, T Singer US Patent 11,447,818, 2022 | 6 | 2022 |
Analytical performance of TruSight® Tumor 170 on small nucleotide variations and gene amplifications using DNA from formalin-fixed, paraffin-embedded (FFPE) solid tumor samples D Chou, X Chen, A Purdy, L Teng, B Luo, C Zhao, L Ball, A Castaneda, ... Cancer Research 77 (13_Supplement), 3732-3732, 2017 | 6 | 2017 |
Analytical performance of TruSight® Tumor 170 in the detection of gene fusions and splice variants using RNA from formalin-fixed, paraffin-embedded (FFPE) solid tumor samples T Du, J Snedecor, JS LoCoco, X Chen, L Ball, A Castaneda, D Chou, ... Cancer Research 77 (13_Supplement), 565-565, 2017 | 4 | 2017 |
Evaluation of Quantity, Quality, and Performance with the TruSight® Tumor 170 Solid Tumor Profiling Assay of Nucleic Acids Extracted from Formalin-Fixed Paraffin-Embedded (FFPE … JS LoCoco, L Teng, DM Chou, X Chen, B Luo, J Sayne, A Adams, N Ajili, ... Cancer Research 77 (13 Supplement), 5354-5354, 2017 | 2 | 2017 |
UNIVERSAL SHORT ADAPTERS WITH VARIABLE LENGTH NON-RANDOM UNIQUE MOLECULAR IDENTIFIERS C Zhao, K Wu, H Chuang, J Lococo, A So, D Baker, T Singer US Patent App. 18/397,836, 2024 | | 2024 |
Universal short adapters with variable length non-random unique molecular identifiers C Zhao, K Wu, HY Chuang, J Lococo, A So, D Baker, T Singer US Patent 11,898,198, 2024 | | 2024 |
Methods and systems for generation and error-correction of unique molecular index sets with heterogeneous molecular lengths K Wu, C Zhao, HY Chuang, A So, S Tanner, SM Gross US Patent App. 18/230,114, 2024 | | 2024 |
Methods and systems for generation and error-correction of unique molecular index sets with heterogeneous molecular lengths K Wu, C Zhao, HY Chuang, A So, S Tanner, SM Gross US Patent 11,761,035, 2023 | | 2023 |
SYSTEMS AND METHODS FOR GROUPING AND COLLAPSING SEQUENCING READS C Zhao, KE Wu, S Bilke US Patent App. 18/316,939, 2023 | | 2023 |
Systems and methods for grouping and collapsing sequencing reads C Zhao, KE Wu, S Bilke US Patent 11,688,489, 2023 | | 2023 |
métodos para sequenciar moléculas de ácido nucleico e para preparar adaptadores de sequenciamento, produto de programa de computador, e, sistema de computador. K Wu, C Zhao, HY Chuang, A So, S Tanner, SM Gross | | 2020 |
Influence of Blood Collection Tube Types on cfDNA Yields and Quantification Comparison S Katz, JS Lococo, A Purdy, Y Han, B Crain, S Johansen, D Chou, ... JOURNAL OF MOLECULAR DIAGNOSTICS 19 (6), 1048-1048, 2017 | | 2017 |
Evaluation of Two Methods for Generating Circulating Cell-Free DNA Reference Materials L Liu, D Chou, H Chuang, B Crain, T Du, G Granger, Y Gua, Y Han, ... JOURNAL OF MOLECULAR DIAGNOSTICS 19 (6), 1045-1045, 2017 | | 2017 |