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Ryan J. Andrews
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Targeting the SARS-CoV-2 RNA genome with small molecule binders and ribonuclease targeting chimera (RIBOTAC) degraders
HS Haniff, Y Tong, X Liu, JL Chen, BM Suresh, RJ Andrews, JM Peterson, ...
ACS Central Science 6 (10), 1713-1721, 2020
1742020
A map of the SARS-CoV-2 RNA structurome
RJ Andrews, CA O’Leary, VS Tompkins, JM Peterson, HS Haniff, ...
NAR genomics and bioinformatics 3 (2), lqab043, 2021
109*2021
Translation of the intrinsically disordered protein α-synuclein is inhibited by a small molecule targeting its structured mRNA
P Zhang, HJ Park, J Zhang, E Junn, RJ Andrews, SP Velagapudi, ...
Proceedings of the National Academy of Sciences 117 (3), 1457-1467, 2020
912020
ScanFold: an approach for genome-wide discovery of local RNA structural elements—applications to Zika virus and HIV
RJ Andrews, J Roche, WN Moss
PeerJ 6, e6136, 2018
772018
Design of small molecules targeting RNA structure from sequence
A Ursu, JL Childs-Disney, RJ Andrews, CA O’Leary, SM Meyer, ...
Chemical Society Reviews 49 (20), 7252-7270, 2020
542020
RNAStructuromeDB: A genome-wide database for RNA structural inference
RJ Andrews, L Baber, WN Moss
Scientific Reports 7 (1), 17269, 2017
392017
Mapping the RNA structural landscape of viral genomes
RJ Andrews, L Baber, WN Moss
Methods 183, 57-67, 2020
272020
Structure-specific cleavage of an RNA repeat expansion with a dimeric small molecule is advantageous over sequence-specific recognition by an oligonucleotide
RI Benhamou, AJ Angelbello, RJ Andrews, ET Wang, WN Moss, ...
ACS chemical biology 15 (2), 485-493, 2020
262020
Plasmodium falciparum translational machinery condones polyadenosine repeats
S Pavlovic Djuranovic, J Erath, RJ Andrews, PO Bayguinov, JJ Chung, ...
Elife 9, e57799, 2020
252020
Crowder-induced conformational ensemble shift in Escherichia coli Prolyl-tRNA synthetase
LM Adams, RJ Andrews, QH Hu, HL Schmit, S Hati, S Bhattacharyya
Biophysical Journal 117 (7), 1269-1284, 2019
192019
RNA structural analysis of the MYC mRNA reveals conserved motifs that affect gene expression
CA O’Leary, RJ Andrews, VS Tompkins, JL Chen, JL Childs-Disney, ...
PLoS One 14 (6), e0213758, 2019
192019
The competitive landscape of the dsRNA world
KA Cottrell, RJ Andrews, BL Bass
Molecular Cell, 2024
182024
ScanFold 2.0: a rapid approach for identifying potential structured RNA targets in genomes and transcriptomes
RJ Andrews, WB Rouse, CA O’Leary, NJ Booher, WN Moss
PeerJ 10, e14361, 2022
142022
A survey of RNA secondary structural propensity encoded within human herpesvirus genomes: global comparisons and local motifs
RJ Andrews, CA O’Leary, WN Moss
PeerJ 8, e9882, 2020
122020
Computational approaches for the discovery of splicing regulatory RNA structures
RJ Andrews, WN Moss
Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1862 (11-12 …, 2019
112019
Prediction and analysis of functional RNA structures within the integrative genomics viewer
WB Rouse, RJ Andrews, NJ Booher, J Wang, ME Woodman, ER Dow, ...
NAR Genomics and Bioinformatics 4 (1), lqab127, 2022
82022
Analyses of human cancer driver genes uncovers evolutionarily conserved RNA structural elements involved in posttranscriptional control
VS Tompkins, WB Rouse, CA O’Leary, RJ Andrews, WN Moss
PLoS One 17 (2), e0264025, 2022
62022
A Comparative Study of All-atom Molecular Dynamics Simulation and Coarse-grained Normal Mode Analysis in Identifying Pre-existing Residue Interaction Networks that Promote …
SC Fehling, AM Strom, BP Lehman, RJ Andrews, S Bhattacharyya, S Hati
American Journal of Undergraduate Research 14 (2), 2017
12017
Secondary structural characterization of non-coding RNAs
CA O'Leary, WB Rouse, JM Peterson, VS Tompkins, RJ Andrews, ...
Navigating Non-Coding RNA, 175-208, 2023
2023
Folding the druggable RNA structurome
W Moss, C O'Leary, R Andrews
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019
2019
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