Targeting the SARS-CoV-2 RNA genome with small molecule binders and ribonuclease targeting chimera (RIBOTAC) degraders HS Haniff, Y Tong, X Liu, JL Chen, BM Suresh, RJ Andrews, JM Peterson, ... ACS Central Science 6 (10), 1713-1721, 2020 | 174 | 2020 |
A map of the SARS-CoV-2 RNA structurome RJ Andrews, CA O’Leary, VS Tompkins, JM Peterson, HS Haniff, ... NAR genomics and bioinformatics 3 (2), lqab043, 2021 | 109* | 2021 |
Translation of the intrinsically disordered protein α-synuclein is inhibited by a small molecule targeting its structured mRNA P Zhang, HJ Park, J Zhang, E Junn, RJ Andrews, SP Velagapudi, ... Proceedings of the National Academy of Sciences 117 (3), 1457-1467, 2020 | 91 | 2020 |
ScanFold: an approach for genome-wide discovery of local RNA structural elements—applications to Zika virus and HIV RJ Andrews, J Roche, WN Moss PeerJ 6, e6136, 2018 | 77 | 2018 |
Design of small molecules targeting RNA structure from sequence A Ursu, JL Childs-Disney, RJ Andrews, CA O’Leary, SM Meyer, ... Chemical Society Reviews 49 (20), 7252-7270, 2020 | 54 | 2020 |
RNAStructuromeDB: A genome-wide database for RNA structural inference RJ Andrews, L Baber, WN Moss Scientific Reports 7 (1), 17269, 2017 | 39 | 2017 |
Mapping the RNA structural landscape of viral genomes RJ Andrews, L Baber, WN Moss Methods 183, 57-67, 2020 | 27 | 2020 |
Structure-specific cleavage of an RNA repeat expansion with a dimeric small molecule is advantageous over sequence-specific recognition by an oligonucleotide RI Benhamou, AJ Angelbello, RJ Andrews, ET Wang, WN Moss, ... ACS chemical biology 15 (2), 485-493, 2020 | 26 | 2020 |
Plasmodium falciparum translational machinery condones polyadenosine repeats S Pavlovic Djuranovic, J Erath, RJ Andrews, PO Bayguinov, JJ Chung, ... Elife 9, e57799, 2020 | 25 | 2020 |
Crowder-induced conformational ensemble shift in Escherichia coli Prolyl-tRNA synthetase LM Adams, RJ Andrews, QH Hu, HL Schmit, S Hati, S Bhattacharyya Biophysical Journal 117 (7), 1269-1284, 2019 | 19 | 2019 |
RNA structural analysis of the MYC mRNA reveals conserved motifs that affect gene expression CA O’Leary, RJ Andrews, VS Tompkins, JL Chen, JL Childs-Disney, ... PLoS One 14 (6), e0213758, 2019 | 19 | 2019 |
The competitive landscape of the dsRNA world KA Cottrell, RJ Andrews, BL Bass Molecular Cell, 2024 | 18 | 2024 |
ScanFold 2.0: a rapid approach for identifying potential structured RNA targets in genomes and transcriptomes RJ Andrews, WB Rouse, CA O’Leary, NJ Booher, WN Moss PeerJ 10, e14361, 2022 | 14 | 2022 |
A survey of RNA secondary structural propensity encoded within human herpesvirus genomes: global comparisons and local motifs RJ Andrews, CA O’Leary, WN Moss PeerJ 8, e9882, 2020 | 12 | 2020 |
Computational approaches for the discovery of splicing regulatory RNA structures RJ Andrews, WN Moss Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1862 (11-12 …, 2019 | 11 | 2019 |
Prediction and analysis of functional RNA structures within the integrative genomics viewer WB Rouse, RJ Andrews, NJ Booher, J Wang, ME Woodman, ER Dow, ... NAR Genomics and Bioinformatics 4 (1), lqab127, 2022 | 8 | 2022 |
Analyses of human cancer driver genes uncovers evolutionarily conserved RNA structural elements involved in posttranscriptional control VS Tompkins, WB Rouse, CA O’Leary, RJ Andrews, WN Moss PLoS One 17 (2), e0264025, 2022 | 6 | 2022 |
A Comparative Study of All-atom Molecular Dynamics Simulation and Coarse-grained Normal Mode Analysis in Identifying Pre-existing Residue Interaction Networks that Promote … SC Fehling, AM Strom, BP Lehman, RJ Andrews, S Bhattacharyya, S Hati American Journal of Undergraduate Research 14 (2), 2017 | 1 | 2017 |
Secondary structural characterization of non-coding RNAs CA O'Leary, WB Rouse, JM Peterson, VS Tompkins, RJ Andrews, ... Navigating Non-Coding RNA, 175-208, 2023 | | 2023 |
Folding the druggable RNA structurome W Moss, C O'Leary, R Andrews ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019 | | 2019 |