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Joseph Lee
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Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
FJ Pardo-Palacios, D Wang, F Reese, M Diekhans, S Carbonell-Sala, ...
Nature methods, 1-15, 2024
752024
Context-aware transcript quantification from long-read RNA-seq data with Bambu
Y Chen, A Sim, YK Wan, K Yeo, JJX Lee, MH Ling, MI Love, J Göke
Nature methods 20 (8), 1187-1195, 2023
632023
BANKSY unifies cell typing and tissue domain segmentation for scalable spatial omics data analysis
V Singhal, N Chou, J Lee, Y Yue, J Liu, WK Chock, L Lin, YC Chang, ...
Nature Genetics 56 (3), 431-441, 2024
382024
BANKSY: a spatial omics algorithm that unifies cell type clustering and tissue domain segmentation
V Singhal, N Chou, J Lee, J Liu, WK Chock, L Lin, YC Chang, E Teo, ...
bioRxiv, 2022.04. 14.488259, 2022
132022
Comparative transcriptomic and molecular pathway analyses of HL-CZ human pro-monocytic cells expressing SARS-CoV-2 spike S1, S2, NP, NSP15 and NSP16 genes
A Sharma, JW Ong, MF Loke, EG Chua, JJ Lee, HW Choi, YJ Tan, SK Lal, ...
Microorganisms 9 (6), 1193, 2021
112021
Differential effects of microRNAs miR‐21, miR‐99 and miR‐145 on lung regeneration and inflammation during recovery from influenza pneumonia
JWJ Ong, KS Tan, JJX Lee, JE Seet, HW Choi, SG Ler, J Gunaratne, ...
Journal of Medical Virology 95 (12), e29286, 2023
22023
Non‐genetic and genetic rewiring underlie adaptation to hypomorphic alleles of an essential gene
A Targa, KE Larrimore, CK Wong, YL Chong, R Fung, J Lee, H Choi, ...
The EMBO Journal 40 (21), e107839, 2021
22021
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