Systematic assessment of long-read RNA-seq methods for transcript identification and quantification FJ Pardo-Palacios, D Wang, F Reese, M Diekhans, S Carbonell-Sala, ... Nature methods, 1-15, 2024 | 75 | 2024 |
Context-aware transcript quantification from long-read RNA-seq data with Bambu Y Chen, A Sim, YK Wan, K Yeo, JJX Lee, MH Ling, MI Love, J Göke Nature methods 20 (8), 1187-1195, 2023 | 63 | 2023 |
BANKSY unifies cell typing and tissue domain segmentation for scalable spatial omics data analysis V Singhal, N Chou, J Lee, Y Yue, J Liu, WK Chock, L Lin, YC Chang, ... Nature Genetics 56 (3), 431-441, 2024 | 38 | 2024 |
BANKSY: a spatial omics algorithm that unifies cell type clustering and tissue domain segmentation V Singhal, N Chou, J Lee, J Liu, WK Chock, L Lin, YC Chang, E Teo, ... bioRxiv, 2022.04. 14.488259, 2022 | 13 | 2022 |
Comparative transcriptomic and molecular pathway analyses of HL-CZ human pro-monocytic cells expressing SARS-CoV-2 spike S1, S2, NP, NSP15 and NSP16 genes A Sharma, JW Ong, MF Loke, EG Chua, JJ Lee, HW Choi, YJ Tan, SK Lal, ... Microorganisms 9 (6), 1193, 2021 | 11 | 2021 |
Differential effects of microRNAs miR‐21, miR‐99 and miR‐145 on lung regeneration and inflammation during recovery from influenza pneumonia JWJ Ong, KS Tan, JJX Lee, JE Seet, HW Choi, SG Ler, J Gunaratne, ... Journal of Medical Virology 95 (12), e29286, 2023 | 2 | 2023 |
Non‐genetic and genetic rewiring underlie adaptation to hypomorphic alleles of an essential gene A Targa, KE Larrimore, CK Wong, YL Chong, R Fung, J Lee, H Choi, ... The EMBO Journal 40 (21), e107839, 2021 | 2 | 2021 |