Can DNA-based ecosystem assessments quantify species abundance? Testing primer bias and biomass—sequence relationships with an innovative metabarcoding protocol V Elbrecht, F Leese PloS one 10 (7), e0130324, 2015 | 718 | 2015 |
Pan genome of the phytoplankton Emiliania underpins its global distribution BA Read, J Kegel, MJ Klute, A Kuo, SC Lefebvre, F Maumus, C Mayer, ... Nature 499 (7457), 209-213, 2013 | 526 | 2013 |
The future of biotic indices in the ecogenomic era: Integrating (e) DNA metabarcoding in biological assessment of aquatic ecosystems J Pawlowski, M Kelly-Quinn, F Altermatt, L Apothéloz-Perret-Gentil, P Beja, ... Science of the Total Environment 637, 1295-1310, 2018 | 482 | 2018 |
DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work H Weigand, AJ Beermann, F Čiampor, FO Costa, Z Csabai, S Duarte, ... Science of the Total Environment 678, 499-524, 2019 | 425 | 2019 |
Validation and development of COI metabarcoding primers for freshwater macroinvertebrate bioassessment V Elbrecht, F Leese Frontiers in Environmental Science 5, 11, 2017 | 398 | 2017 |
Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus T Mock, RP Otillar, J Strauss, M McMullan, P Paajanen, J Schmutz, ... Nature 541 (7638), 536-540, 2017 | 377 | 2017 |
Implementation options for DNA-based identification into ecological status assessment under the European Water Framework Directive D Hering, A Borja, JI Jones, D Pont, P Boets, A Bouchez, K Bruce, ... Water research 138, 192-205, 2018 | 370 | 2018 |
Assessing strengths and weaknesses of DNA metabarcoding‐based macroinvertebrate identification for routine stream monitoring V Elbrecht, EE Vamos, K Meissner, J Aroviita, F Leese Methods in Ecology and Evolution 8 (10), 1265-1275, 2017 | 339 | 2017 |
Deep learning and computer vision will transform entomology TT Høye, J Ärje, K Bjerge, OLP Hansen, A Iosifidis, F Leese, HMR Mann, ... Proceedings of the National Academy of Sciences 118 (2), e2002545117, 2021 | 310 | 2021 |
Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap T Cordier, L Alonso‐Sáez, L Apothéloz‐Perret‐Gentil, E Aylagas, ... Molecular Ecology 30 (13), 2937-2958, 2021 | 201 | 2021 |
Sorting things out: Assessing effects of unequal specimen biomass on DNA metabarcoding V Elbrecht, B Peinert, F Leese Ecology and evolution 7 (17), 6918-6926, 2017 | 190 | 2017 |
Why we need sustainable networks bridging countries, disciplines, cultures and generations for aquatic biomonitoring 2.0: a perspective derived from the DNAqua-Net COST action F Leese, A Bouchez, K Abarenkov, F Altermatt, Á Borja, K Bruce, T Ekrem, ... Advances in ecological research 58, 63-99, 2018 | 167 | 2018 |
DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe F Leese, F Altermatt, A Bouchez, T Ekrem, D Hering, K Meissner, ... Research Ideas and Outcomes 2, e11321, 2016 | 166 | 2016 |
Short COI markers for freshwater macroinvertebrate metabarcoding EE Vamos, V Elbrecht, F Leese PeerJ Preprints, 2017 | 159 | 2017 |
Testing the potential of a ribosomal 16S marker for DNA metabarcoding of insects V Elbrecht, P Taberlet, T Dejean, A Valentini, P Usseglio-Polatera, ... PeerJ 4, e1966, 2016 | 154 | 2016 |
Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring M Sagova-Mareckova, J Boenigk, A Bouchez, K Cermakova, T Chonova, ... Water research 191, 116767, 2021 | 143 | 2021 |
Estimating intraspecific genetic diversity from community DNA metabarcoding data V Elbrecht, EE Vamos, D Steinke, F Leese PeerJ 6, e4644, 2018 | 138 | 2018 |
A global agenda for advancing freshwater biodiversity research A Maasri, SC Jähnig, MC Adamescu, R Adrian, C Baigun, DJ Baird, ... Ecology Letters 25 (2), 255-263, 2022 | 134 | 2022 |
Multiple‐stressor effects on stream invertebrates: a mesocosm experiment manipulating nutrients, fine sediment and flow velocity V Elbrecht, AJ Beermann, G Goessler, J Neumann, R Tollrian, R Wagner, ... Freshwater Biology 61 (4), 362-375, 2016 | 126 | 2016 |
Multiple-stressor effects on stream macroinvertebrate communities: A mesocosm experiment manipulating salinity, fine sediment and flow velocity AJ Beermann, V Elbrecht, S Karnatz, L Ma, CD Matthaei, JJ Piggott, ... Science of the Total Environment 610, 961-971, 2018 | 122 | 2018 |