The immune landscape of cancer V Thorsson, DL Gibbs, SD Brown, D Wolf, DS Bortone, THO Yang, ... Immunity 48 (4), 812-830. e14, 2018 | 4666 | 2018 |
Promoter of lncRNA gene PVT1 is a tumor-suppressor DNA boundary element SW Cho, J Xu, R Sun, MR Mumbach, AC Carter, YG Chen, KE Yost, J Kim, ... Cell 173 (6), 1398-1412. e22, 2018 | 430 | 2018 |
Experimental microdissection enables functional harmonisation of pancreatic cancer subtypes C Maurer, SR Holmstrom, J He, P Laise, T Su, A Ahmed, H Hibshoosh, ... Gut 68 (6), 1034-1043, 2019 | 189 | 2019 |
REGγ is associated with multiple oncogenic pathways in human cancers J He, L Cui, Y Zeng, G Wang, P Zhou, Y Yang, L Ji, Y Zhao, J Chen, ... BMC cancer 12 (1), 75, 2012 | 75 | 2012 |
A framework for highly multiplexed dextramer mapping and prediction of T cell receptor sequences to antigen specificity GSA Wen Zhang, Peter G. Hawkins, Jing He, Namita T. Gupta, Jinrui Liu ... SCIENCE ADVANCES, 2021 | 69 | 2021 |
Pparg promotes differentiation and regulates mitochondrial gene expression in bladder epithelial cells C Liu, T Tate, E Batourina, ST Truschel, S Potter, M Adam, T Xiang, ... Nature Communications 10 (1), 4589, 2019 | 65 | 2019 |
Comparative Analysis of REGγ Expression in Mouse and Human Tissues G Yu, Y Zhao, J He, DM Lonard, CA Mao, G Wang, M Li, X Li Journal of molecular cell biology 2 (4), 192-198, 2010 | 25 | 2010 |
Cancer cell-derived type I interferons instruct tumor monocyte polarization D Kwart, J He, S Srivatsan, C Lett, J Golubov, EM Oswald, P Poon, X Ye, ... Cell Reports 41 (10), 2022 | 17 | 2022 |
Accelerated parallel algorithm for gene network reverse engineering J He, Z Zhou, M Reed, A Califano BMC Systems Biology 11 (Suppl 4), 83, 2017 | 13 | 2017 |
A framework for highly multiplexed dextramer mapping and prediction of T cell receptor sequences to antigen specificity. Sci. Adv. 7, eabf5835 W Zhang, PG Hawkins, J He, NT Gupta, J Liu, G Choonoo, SW Jeong, ... | 5 | 2021 |
Elucidating synergistic dependencies in lung adenocarcinoma by proteome-wide signaling-network analysis M Bansal, J He, M Peyton, M Kustagi, A Iyer, M Comb, M White, JD Minna, ... Plos one 14 (1), e0208646, 2019 | 5 | 2019 |
Transcriptional deconvolution reveals consistent functional subtypes of pancreatic cancer epithelium and stroma J He, HC Maurer, SR Holmstrom, T Su, A Ahmed, H Hibshoosh, ... biorxiv, 2018 | 5 | 2018 |
Network-based elucidation of colon cancer drug resistance by phosphoproteomic time-series analysis G Rosenberger, W Li, M Turunen, J He, PS Subramaniam, S Pampou, ... bioRxiv, 2023 | 3 | 2023 |
Abstract IA16: Reconstructing compartment− specific regulatory programs in pancreatic cancer HC Maurer, J He, MJ Alvarez, F Giorgi, S Holmstrom, A Califano, KP Olive Cancer Research 76 (24_Supplement), IA16-IA16, 2016 | 1 | 2016 |
Network-based elucidation of colon cancer drug resistance mechanisms by phosphoproteomic time-series analysis G Rosenberger, W Li, M Turunen, J He, PS Subramaniam, S Pampou, ... Nature Communications 15 (1), 3909, 2024 | | 2024 |
Methods and systems for analysis of receptor interaction W Zhang, J He, N Gupta, GS Atwal, P Hawkins US Patent App. 17/236,998, 2021 | | 2021 |
Systems biology approaches to precision medicine J He Columbia University, 2017 | | 2017 |