| Functional annotation of human long Non-Coding RNAs via molecular phenotyping J Ramilowski, CW Yip, S Agrawal, JC Chang, Y Ciani, IV Kulakovskiy, ... Genome Research 30 (7), 1060–1072, 2020 | 144 | 2020 |
| Reversing methanogenesis to capture methane for liquid biofuel precursors VWC Soo, MJ McAnulty, A Tripathi, F Zhu, L Zhang, E Hatzakis, PB Smith, ... Microbial cell factories 15, 1-14, 2016 | 142 | 2016 |
| The shared genomic architecture of human nucleolar organizer regions I Floutsakou, S Agrawal, TT Nguyen, C Seoighe, ARD Ganley, B McStay Genome research 23 (12), 2003-2012, 2013 | 140 | 2013 |
| RADICL-seq identifies general and cell type–specific principles of genome-wide RNA-chromatin interactions A Bonetti, F Agostini, AM Suzuki, K Hashimoto, G Pascarella, J Gimenez, ... Nature Communications 11 (1), 1018, 2020 | 130 | 2020 |
| FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs I Abugessaisa, JA Ramilowski, M Lizio, J Severin, A Hasegawa, ... Nucleic acids research 49 (D1), D892-D898, 2021 | 82 | 2021 |
| The conservation landscape of the human ribosomal RNA gene repeats S Agrawal, ARD Ganley PloS one 13 (12), e0207531, 2018 | 74 | 2018 |
| Comparative transcriptomics of primary cells in vertebrates T Alam, S Agrawal, J Severin, RS Young, R Andersson, E Arner, ... Genome research 30 (7), 951-961, 2020 | 41 | 2020 |
| LETR1 is a lymphatic endothelial-specific lncRNA governing cell proliferation and migration through KLF4 and SEMA3C L Ducoli, S Agrawal, E Sibler, T Kouno, C Tacconi, CC Hon, SD Berger, ... Nature Communications 12 (1), 925, 2021 | 24 | 2021 |
| Antisense-oligonucleotide-mediated perturbation of long non-coding RNA reveals functional features in stem cells and across cell types CW Yip, CC Hon, K Yasuzawa, DM Sivaraman, JA Ramilowski, ... Cell reports 41 (13), 2022 | 15 | 2022 |
| Complete sequence construction of the highly repetitive ribosomal RNA gene repeats in eukaryotes using whole genome sequence data S Agrawal, ARD Ganley The Nucleolus: Methods and Protocols, 161-181, 2016 | 15 | 2016 |
| ZENBU-Reports: a graphical web-portal builder for interactive visualization and dissemination of genome-scale data J Severin, S Agrawal, JA Ramilowski, R Deviatiiarov, JW Shin, P Carninci, ... NAR Genomics and Bioinformatics 5 (3), lqad075, 2023 | 1 | 2023 |
| The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background L Ducoli, S Agrawal, CC Hon, JA Ramilowski, E Sibler, M Tagami, M Itoh, ... BMC Genomic Data 22, 1-10, 2021 | 1 | 2021 |
| Annotation of nuclear lncRNAs based on chromatin interactions S Agrawal, A Buyan, J Severin, M Koido, T Alam, I Abugessaisa, ... Plos one 19 (5), e0295971, 2024 | | 2024 |
| Unidirectional expression of enhancers with cell type-dependent direction of transcription S Agrawal, E Kanamaru, Y Saito, F Ishikawa, M de Hoon bioRxiv, 2023.06. 27.546647, 2023 | | 2023 |
| Characterization of the human nucleolar organizer regions: a dissertation presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Genetics … S Agrawal Massey University, 2014 | | 2014 |
