| Comparative analysis of the receptor-like kinase family in Arabidopsis and rice SH Shiu, WM Karlowski, R Pan, YH Tzeng, KFX Mayer, WH Li The plant cell 16 (5), 1220-1234, 2004 | 1200 | 2004 |
| Alignment-free sequence comparison: benefits, applications, and tools A Zielezinski, S Vinga, J Almeida, WM Karlowski Genome biology 18, 1-17, 2017 | 528 | 2017 |
| Sequence composition and genome organization of maize J Messing, AK Bharti, WM Karlowski, H Gundlach, HR Kim, Y Yu, F Wei, ... Proceedings of the National Academy of Sciences 101 (40), 14349-14354, 2004 | 345 | 2004 |
| START lipid/sterol-binding domains are amplified in plants and are predominantly associated with homeodomain transcription factors K Schrick, D Nguyen, WM Karlowski, KFX Mayer Genome biology 5, 1-16, 2004 | 305 | 2004 |
| RNAcentral: a hub of information for non-coding RNA sequences Nucleic Acids Research 47 (D1), D221-D229, 2019 | 232 | 2019 |
| Complex regulation of two target genes encoding SPX-MFS proteins by rice miR827 in response to phosphate starvation SI Lin, C Santi, E Jobet, E Lacut, N El Kholti, WM Karlowski, JL Verdeil, ... Plant and Cell Physiology 51 (12), 2119-2131, 2010 | 200 | 2010 |
| Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses M Barciszewska-Pacak, K Milanowska, K Knop, D Bielewicz, P Nuc, ... Frontiers in plant science 6, 410, 2015 | 196 | 2015 |
| Benchmarking of alignment-free sequence comparison methods A Zielezinski, HZ Girgis, G Bernard, CA Leimeister, K Tang, T Dencker, ... Genome biology 20, 1-18, 2019 | 193 | 2019 |
| RNAcentral 2021: secondary structure integration, improved sequence search and new member databases Nucleic acids research 49 (D1), D212-D220, 2021 | 181 | 2021 |
| Dual role of the histone variant H2A. Z in transcriptional regulation of stress-response genes W Sura, M Kabza, WM Karlowski, T Bieluszewski, M Kus-Slowinska, ... The Plant Cell 29 (4), 791-807, 2017 | 181 | 2017 |
| NERD, a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based pathway in Arabidopsis D Pontier, C Picart, F Roudier, D Garcia, S Lahmy, J Azevedo, E Alart, ... Molecular cell 48 (1), 121-132, 2012 | 169 | 2012 |
| Transcriptionally and post-transcriptionally regulated microRNAs in heat stress response in barley K Kruszka, A Pacak, A Swida-Barteczka, P Nuc, S Alaba, Z Wroblewska, ... Journal of Experimental Botany 65 (20), 6123-6135, 2014 | 167 | 2014 |
| Genome-wide computational identification of WG/GW Argonaute-binding proteins in Arabidopsis WM Karlowski, A Zielezinski, J Carrere, D Pontier, T Lagrange, R Cooke Nucleic acids research 38 (13), 4231-4245, 2010 | 71 | 2010 |
| The liverwort Pellia endiviifolia shares microtranscriptomic traits that are common to green algae and land plants S Alaba, P Piszczalka, H Pietrykowska, AM Pacak, I Sierocka, PW Nuc, ... New Phytologist 206 (1), 352-367, 2015 | 66 | 2015 |
| mirEX 2.0-an integrated environment for expression profiling of plant microRNAs A Zielezinski, J Dolata, S Alaba, K Kruszka, A Pacak, A Swida-Barteczka, ... BMC plant biology 15, 1-9, 2015 | 59 | 2015 |
| Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice S Lacombe, H Nagasaki, C Santi, D Duval, B Piégu, M Bangratz, ... BMC plant biology 8, 1-19, 2008 | 59 | 2008 |
| Efficiency of PacBio long read correction by 2nd generation Illumina sequencing M Mahmoud, M Zywicki, T Twardowski, WM Karlowski Genomics 111 (1), 43-49, 2019 | 53 | 2019 |
| The over-expression of an alfalfa RING-H2 gene induces pleiotropic effects on plant growth and development WM Karlowski, AM Hirsch Plant molecular biology 52, 121-133, 2003 | 52 | 2003 |
| Developmentally regulated expression and complex processing of barley pri-microRNAs K Kruszka, A Pacak, A Swida-Barteczka, AK Stefaniak, E Kaja, I Sierocka, ... BMC genomics 14, 1-19, 2013 | 51 | 2013 |
| mirEX: a platform for comparative exploration of plant pri-miRNA expression data D Bielewicz, J Dolata, A Zielezinski, S Alaba, B Szarzynska, ... Nucleic acids research 40 (D1), D191-D197, 2012 | 51 | 2012 |
