| Concepts in Boolean network modeling: What do they all mean? JD Schwab, SD Kühlwein, N Ikonomi, M Kühl, HA Kestler Computational and structural biotechnology journal 18, 571-582, 2020 | 190 | 2020 |
| A Boolean network of the crosstalk between IGF and Wnt signaling in aging satellite cells L Siegle, JD Schwab, SD Kühlwein, L Lausser, S Tümpel, AS Pfister, ... PLoS One 13 (3), e0195126, 2018 | 42 | 2018 |
| Representing dynamic biological networks with multi-scale probabilistic models A Groß, B Kracher, JM Kraus, SD Kühlwein, AS Pfister, S Wiese, K Luckert, ... Communications biology 2 (1), 21, 2019 | 39 | 2019 |
| Reconstructing Boolean network ensembles from single-cell data for unraveling dynamics in the aging of human hematopoietic stem cells JD Schwab, N Ikonomi, SD Werle, FM Weidner, H Geiger, HA Kestler Computational and structural biotechnology journal 19, 5321-5332, 2021 | 33 | 2021 |
| YAP Activation Drives Liver Regeneration after Cholestatic Damage Induced by Rbpj Deletion U Tharehalli, M Svinarenko, JM Kraus, SD Kühlwein, R Szekely, U Kiesle, ... International Journal of Molecular Sciences 19 (12), 3801, 2018 | 23 | 2018 |
| Awakening the HSC: dynamic modeling of HSC maintenance unravels regulation of the TP53 pathway and quiescence N Ikonomi, SD Kühlwein, JD Schwab, HA Kestler Frontiers in Physiology 11, 848, 2020 | 21 | 2020 |
| Stability of signaling pathways during aging—a Boolean network approach JD Schwab, L Siegle, SD Kühlwein, M Kühl, HA Kestler Biology 6 (4), 46, 2017 | 21 | 2017 |
| Interaction empowerment in mobile health: concepts, challenges, and perspectives M Hamberger, N Ikonomi, JD Schwab, SD Werle, A Fürstberger, ... JMIR mHealth and uHealth 10 (4), e32696, 2022 | 19 | 2022 |
| Unraveling the molecular tumor-promoting regulation of cofilin-1 in pancreatic cancer SD Werle, JD Schwab, M Tatura, S Kirchhoff, R Szekely, R Diels, ... Cancers 13 (4), 725, 2021 | 17 | 2021 |
| Analysis, identification and visualization of subgroups in genomics G Völkel, S Laban, A Fürstberger, SD Kühlwein, N Ikonomi, TK Hoffmann, ... Briefings in Bioinformatics 22 (3), bbaa217, 2021 | 11 | 2021 |
| Capturing dynamic relevance in Boolean networks using graph theoretical measures FM Weidner, JD Schwab, SD Werle, N Ikonomi, L Lausser, HA Kestler Bioinformatics 37 (20), 3530-3537, 2021 | 9 | 2021 |
| Supporting Medical Staff from Psycho-Oncology with Smart Mobile Devices: Insights into the Development Process and First Results J Schobel, M Volz, K Hörner, P Kuhn, F Jobst, JD Schwab, N Ikonomi, ... International Journal of Environmental Research and Public Health 18 (10), 5092, 2021 | 9 | 2021 |
| Leveraging quantum computing for dynamic analyses of logical networks in systems biology FM Weidner, JD Schwab, S Wölk, F Rupprecht, N Ikonomi, SD Werle, ... Patterns 4 (3), 2023 | 8 | 2023 |
| 3D Network exploration and visualisation for lifespan data R Hühne, V Kessler, A Fürstberger, S Kühlwein, M Platzer, J Sühnel, ... BMC bioinformatics 19, 1-19, 2018 | 8 | 2018 |
| Discrete logic modeling of cell signaling pathways N Ikonomi, SD Werle, JD Schwab, HA Kestler TGF-Beta Signaling: Methods and Protocols, 159-181, 2022 | 7 | 2022 |
| Patient empowerment during the COVID-19 pandemic by ensuring safe and fast communication of test results: implementation and performance of a tracking system G Völkel, A Fürstberger, JD Schwab, SD Werle, N Ikonomi, ... Journal of Medical Internet Research 23 (6), e27348, 2021 | 7 | 2021 |
| Detecting ordinal subcascades L Lausser, LM Schäfer, SD Kühlwein, AMR Kestler, HA Kestler Neural Processing Letters 52 (3), 2583-2605, 2020 | 7 | 2020 |
| Perspective on mHealth concepts to ensure users’ empowerment–from adverse event tracking for COVID-19 vaccinations to oncological treatment JD Schwab, J Schobel, SD Werle, A Fuerstberger, N Ikonomi, R Szekely, ... IEEE Access 9, 83863-83875, 2021 | 6 | 2021 |
| Identification of dynamic driver sets controlling phenotypical landscapes SD Werle, N Ikonomi, JD Schwab, JM Kraus, FM Weidner, KL Rudolph, ... Computational and Structural Biotechnology Journal 20, 1603-1617, 2022 | 4 | 2022 |
| GatekeepR: an R Shiny application for the identification of nodes with high dynamic impact in Boolean networks FM Weidner, N Ikonomi, SD Werle, JD Schwab, HA Kestler Bioinformatics 40 (1), btae007, 2024 | 1 | 2024 |
