Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... Nature genetics 52 (3), 331-341, 2020 | 557 | 2020 |
Abstract LB-378: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... Cancer Research 78 (13 Supplement), LB-378-LB-378, 2018 | 557* | 2018 |
Molecular analysis of gut microbiota in obesity among Indian individuals DP Patil, DP Dhotre, SG Chavan, A Sultan, DS Jain, VB Lanjekar, ... Journal of biosciences 37, 647-657, 2012 | 199 | 2012 |
Active promoters give rise to false positive ‘Phantom Peaks’ in ChIP-seq experiments D Jain, S Baldi, A Zabel, T Straub, PB Becker Nucleic acids research 43 (14), 6959-6968, 2015 | 170 | 2015 |
HiNT: a computational method for detecting copy number variations and translocations from Hi-C data S Wang, S Lee, C Chu, D Jain, P Kerpedjiev, GM Nelson, JM Walsh, ... Genome biology 21, 1-15, 2020 | 68 | 2020 |
Genome-wide Rules of Nucleosome Phasing in Drosophila S Baldi, D Jain, L Harpprecht, A Zabel, M Scheibe, F Butter, T Straub, ... Molecular Cell, 2018 | 34 | 2018 |
CHRAC/ACF contribute to the repressive ground state of chromatin A Scacchetti, L Brueckner, D Jain, T Schauer, X Zhang, F Schnorrer, ... Life science alliance 1 (1), 2018 | 27 | 2018 |
Essential histone chaperones collaborate to regulate transcription and chromatin integrity O Viktorovskaya, J Chuang, D Jain, NI Reim, F López-Rivera, ... Genes & Development 35 (9-10), 698-712, 2021 | 23 | 2021 |
Epigenetic transcriptional reprogramming by WT1 mediates a repair response during podocyte injury S Ettou, YL Jung, T Miyoshi, D Jain, K Hiratsuka, V Schumacher, ... Science advances 6 (30), eabb5460, 2020 | 23 | 2020 |
The conserved elongation factor Spn1 is required for normal transcription, histone modifications, and splicing in Saccharomyces cerevisiae NI Reim, J Chuang, D Jain, BH Alver, PJ Park, F Winston Nucleic acids research 48 (18), 10241-10258, 2020 | 20 | 2020 |
EED, a member of the polycomb group, is required for nephron differentiation and the maintenance of nephron progenitor cells L Zhang, S Ettou, M Khalid, M Taglienti, D Jain, YL Jung, C Seager, Y Liu, ... Development 145 (14), dev157149, 2018 | 19 | 2018 |
A role for tuned levels of nucleosome remodeler subunit ACF1 during Drosophila oogenesis K Börner, D Jain, P Vazquez-Pianzola, S Vengadasalam, N Steffen, ... Developmental biology 411 (2), 217-230, 2016 | 19 | 2016 |
Cigarette smoking-associated isoform switching and 3′ UTR lengthening via alternative polyadenylation Z Xu, J Platig, S Lee, A Boueiz, R Chase, D Jain, A Gregory, ... Genomics 113 (6), 4184-4195, 2021 | 7 | 2021 |
Activation of CD8+ T Cells in Chronic Obstructive Pulmonary Disease Lung AB Villaseñor-Altamirano, D Jain, Y Jeong, JA Menon, M Kamiya, ... American Journal of Respiratory and Critical Care Medicine 208 (11), 1177-1195, 2023 | 6 | 2023 |
HiTea: a computational pipeline to identify non-reference transposable element insertions in Hi-C data D Jain, C Chu, BH Alver, S Lee, EA Lee, PJ Park Bioinformatics 37 (8), 1045-1051, 2021 | 5 | 2021 |
Publisher Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... Nature genetics 55 (5), 893-893, 2023 | 3 | 2023 |
Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... nature genetics 55 (6), 1076-1076, 2023 | 2 | 2023 |
Genome-wide analysis of phased nucleosomal arrays reveals the functional characteristic of the nucleosome remodeler ACF DS Jain, S Baldi, A Zabel, T Straub, PB Becker bioRxiv, 093666, 2016 | 2 | 2016 |
Tissue-resident Memory and TEMRA CD8+ T Cells in the Lungs of Patients With Mild-moderate COPD ABB Villaseñor-Altamirano, D Jain, Y Jeong, H Athar, X Zhou, CP Hersh, ... D13. INNATE AND ADAPTIVE IMMUNE MECHANISMS REGULATING LUNG DISEASE, A6201-A6201, 2023 | 1 | 2023 |
Epigenetic profiling reveals key genes and cis-regulatory networks specific to human parathyroids YL Jung, W Zhao, I Li, D Jain, CB Epstein, BE Bernstein, S Parangi, ... Nature Communications 15 (1), 2106, 2024 | | 2024 |