Genome editing reveals a role for OCT4 in human embryogenesis NME Fogarty, A McCarthy, KE Snijders, BE Powell, N Kubikova, ... Nature 550 (7674), 67-73, 2017 | 439 | 2017 |
In Vitro Generation of Neuromesodermal Progenitors Reveals Distinct Roles for Wnt Signalling in the Specification of Spinal Cord and Paraxial Mesoderm Identity M Gouti, A Tsakiridis, FJ Wymeersch, Y Huang, J Kleinjung, V Wilson, ... PLoS biology 12 (8), e1001937, 2014 | 366 | 2014 |
POPS: a fast algorithm for solvent accessible surface areas at atomic and residue level L Cavallo, J Kleinjung, F Fraternali Nucleic acids research 31 (13), 3364-3366, 2003 | 270 | 2003 |
A gene regulatory network balances neural and mesoderm specification during vertebrate trunk development M Gouti, J Delile, D Stamataki, FJ Wymeersch, Y Huang, J Kleinjung, ... Developmental cell 41 (3), 243-261. e7, 2017 | 233 | 2017 |
Design and application of implicit solvent models in biomolecular simulations J Kleinjung, F Fraternali Current opinion in structural biology 25, 126-134, 2014 | 159 | 2014 |
Lineage-dependent spatial and functional organization of the mammalian enteric nervous system R Lasrado, W Boesmans, J Kleinjung, C Pin, D Bell, L Bhaw, S McCallum, ... Science 356 (6339), 722-726, 2017 | 146 | 2017 |
Homology-extended sequence alignment VA Simossis, J Kleinjung, J Heringa Nucleic acids research 33 (3), 816-824, 2005 | 142 | 2005 |
Detection of allosteric signal transmission by information-theoretic analysis of protein dynamics A Pandini, A Fornili, F Fraternali, J Kleinjung Biophysical Journal 102 (3), 225a, 2012 | 120 | 2012 |
Plasticity of influenza haemagglutinin fusion peptides and their interaction with lipid bilayers L Vaccaro, KJ Cross, J Kleinjung, SK Straus, DJ Thomas, SA Wharton, ... Biophysical journal 88 (1), 25-36, 2005 | 105 | 2005 |
Structural alphabets derived from attractors in conformational space A Pandini, A Fornili, J Kleinjung BMC bioinformatics 11, 1-18, 2010 | 84 | 2010 |
Malaria parasite actin polymerization and filament structure S Schmitz, IAT Schaap, J Kleinjung, S Harder, M Grainger, L Calder, ... Journal of Biological Chemistry 285 (47), 36577-36585, 2010 | 67 | 2010 |
Parallelized multiple alignment J Kleinjung, N Douglas, J Heringa Bioinformatics 18 (9), 1270-1271, 2002 | 63 | 2002 |
Tailored graph ensembles as proxies or null models for real networks I: tools for quantifying structure A Annibale, ACC Coolen, LP Fernandes, F Fraternali, J Kleinjung Journal of Physics A: Mathematical and Theoretical 42 (48), 485001, 2009 | 62 | 2009 |
POPSCOMP: an automated interaction analysis of biomolecular complexes J Kleinjung, F Fraternali Nucleic acids research 33 (suppl_2), W342-W346, 2005 | 59 | 2005 |
GSATools: analysis of allosteric communication and functional local motions using a structural alphabet A Pandini, A Fornili, F Fraternali, J Kleinjung Bioinformatics 29 (16), 2053-2055, 2013 | 56 | 2013 |
Functional cross-talk between allosteric effects of activating and inhibiting ligands underlies PKM2 regulation JA Macpherson, A Theisen, L Masino, L Fets, PC Driscoll, V Encheva, ... Elife 8, e45068, 2019 | 39 | 2019 |
An overview of multiple sequence alignment V Simossis, J Kleinjung, J Heringa Current protocols in bioinformatics 3 (1), 3.7. 1-3.7. 26, 2003 | 38 | 2003 |
STRIKE: evaluation of protein MSAs using a single 3D structure C Kemena, JF Taly, J Kleinjung, C Notredame Bioinformatics 27 (24), 3385-3391, 2011 | 37 | 2011 |
Decrypting prion protein conversion into a β-rich conformer by molecular dynamics N Chakroun, A Fornili, S Prigent, J Kleinjung, CA Dreiss, H Rezaei, ... Journal of Chemical Theory and Computation 9 (5), 2455-2465, 2013 | 36 | 2013 |
The crystal structure of the human titin: obscurin complex reveals a conserved yet specific muscle M-band zipper module S Pernigo, A Fukuzawa, A Pandini, M Holt, J Kleinjung, M Gautel, ... Journal of molecular biology 427 (4), 718-736, 2015 | 33 | 2015 |