The human transcription factors SA Lambert, A Jolma, LF Campitelli, PK Das, Y Yin, M Albu, X Chen, ... Cell 172 (4), 650-665, 2018 | 2871 | 2018 |
Impact of cytosine methylation on DNA binding specificities of human transcription factors Y Yin, E Morgunova, A Jolma, E Kaasinen, B Sahu, S Khund-Sayeed, ... Science 356 (6337), eaaj2239, 2017 | 1132 | 2017 |
DNA-dependent formation of transcription factor pairs alters their binding specificity A Jolma, Y Yin, KR Nitta, K Dave, A Popov, M Taipale, M Enge, T Kivioja, ... Nature 527 (7578), 384-388, 2015 | 568 | 2015 |
The interaction landscape between transcription factors and the nucleosome F Zhu, L Farnung, E Kaasinen, B Sahu, Y Yin, B Wei, SO Dodonova, ... Nature 562 (7725), 76-81, 2018 | 324 | 2018 |
Conservation of transcription factor binding specificities across 600 million years of bilateria evolution KR Nitta, A Jolma, Y Yin, E Morgunova, T Kivioja, J Akhtar, K Hens, ... elife 4, e04837, 2015 | 264 | 2015 |
Multiparameter functional diversity of human C2H2 zinc finger proteins FW Schmitges, E Radovani, HS Najafabadi, M Barazandeh, LF Campitelli, ... Genome research 26 (12), 1742-1752, 2016 | 180 | 2016 |
Interleukin-6 disrupts blood-testis barrier through inhibiting protein degradation or activating phosphorylated ERK in Sertoli cells H Zhang, Y Yin, G Wang, Z Liu, L Liu, F Sun Scientific reports 4 (1), 4260, 2014 | 132 | 2014 |
Transcription factor family‐specific DNA shape readout revealed by quantitative specificity models L Yang, Y Orenstein, A Jolma, Y Yin, J Taipale, R Shamir, R Rohs Molecular systems biology 13 (2), 910, 2017 | 124 | 2017 |
Systematic analysis of binding of transcription factors to noncoding variants J Yan, Y Qiu, AM Ribeiro dos Santos, Y Yin, YE Li, N Vinckier, N Nariai, ... Nature 591 (7848), 147-151, 2021 | 112 | 2021 |
Binding specificities of human RNA-binding proteins toward structured and linear RNA sequences A Jolma, J Zhang, E Mondragón, E Morgunova, T Kivioja, KU Laverty, ... Genome research 30 (7), 962-973, 2020 | 88 | 2020 |
Structural insights into the DNA-binding specificity of E2F family transcription factors E Morgunova, Y Yin, A Jolma, K Dave, B Schmierer, A Popov, N Eremina, ... Nature communications 6 (1), 10050, 2015 | 68 | 2015 |
Steroidogenic factor-1 is required for TGF-β3-mediated 17β-estradiol synthesis in mouse ovarian granulosa cells N Liang, Y Xu, Y Yin, G Yao, H Tian, G Wang, J Lian, Y Wang, F Sun Endocrinology 152 (8), 3213-3225, 2011 | 43 | 2011 |
Variation in crossover interference levels on individual chromosomes from human males J Lian, Y Yin, M Oliver-Bonet, T Liehr, E Ko, P Turek, F Sun, RH Martin Human molecular genetics 17 (17), 2583-2594, 2008 | 40 | 2008 |
Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima E Morgunova, Y Yin, PK Das, A Jolma, F Zhu, A Popov, Y Xu, L Nilsson, ... Elife 7, e32963, 2018 | 38 | 2018 |
Subfertile effects of quinestrol and levonorgestrel in male rats M Liu, X Wan, Y Yin, Y Li, F Sun, Z Zhang, Y Wang Reproduction, Fertility and Development 24 (2), 297-308, 2012 | 25 | 2012 |
A compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae L Fan, T Wang, C Hua, W Sun, X Li, L Grunwald, J Liu, N Wu, X Shao, ... Nature Communications 11 (1), 4947, 2020 | 22 | 2020 |
Knockdown of TrkA in cumulus oocyte complexes (COCs) inhibits EGF-induced cumulus expansion by down-regulation of IL-6 Y Wang, N Liang, G Yao, H Tian, Y Zhai, Y Yin, F Sun Molecular and cellular endocrinology 382 (2), 804-813, 2014 | 20 | 2014 |
Nuclear export factor 3 is involved in regulating the expression of TGF-β3 in an mRNA export activity-independent manner in mouse Sertoli cells Y Yin, G Wang, N Liang, H Zhang, Z Liu, W Li, F Sun Biochemical Journal 452 (1), 67-78, 2013 | 20 | 2013 |
Modular discovery of monomeric and dimeric transcription factor binding motifs for large data sets J Toivonen, T Kivioja, A Jolma, Y Yin, J Taipale, E Ukkonen Nucleic acids research 46 (8), e44-e44, 2018 | 17 | 2018 |
Simultaneous profiling of histone modifications and DNA methylation via nanopore sequencing X Yue, Z Xie, M Li, K Wang, X Li, X Zhang, J Yan, Y Yin Nature Communications 13 (1), 7939, 2022 | 16 | 2022 |