| Replicative fitness of transmitted HIV-1 drives acute immune activation, proviral load in memory CD4+ T cells, and disease progression DT Claiborne, JL Prince, E Scully, G Macharia, L Micci, B Lawson, ... Proceedings of the National Academy of Sciences 112 (12), E1480-E1489, 2015 | 123 | 2015 |
| Functional analysis of the 60-nucleotide duplication in the respiratory syncytial virus Buenos Aires strain attachment glycoprotein AL Hotard, E Laikhter, K Brooks, TV Hartert, ML Moore Journal of virology 89 (16), 8258-8266, 2015 | 80 | 2015 |
| HIV-1 variants are archived throughout infection and persist in the reservoir K Brooks, BR Jones, DA Dilernia, DJ Wilkins, DT Claiborne, S McInally, ... PLoS pathogens 16 (6), e1008378, 2020 | 46 | 2020 |
| Mild SARS-CoV-2 infection in rhesus macaques is associated with viral control prior to antigen-specific T cell responses in tissues CE Nelson, S Namasivayam, TW Foreman, KD Kauffman, S Sakai, ... Science Immunology 7 (70), eabo0535, 2022 | 32 | 2022 |
| Better Viral Control despite Higher CD4+ T Cell Activation during Acute HIV-1 Infection in Zambian Women Is Linked to the Sex Hormone Estradiol E El-Badry, G Macharia, D Claiborne, K Brooks, DA Dilernia, P Goepfert, ... Journal of Virology 94 (16), 10.1128/jvi. 00758-20, 2020 | 14 | 2020 |
| Butyrate administration is not sufficient to improve immune reconstitution in antiretroviral-treated SIV-infected macaques AM Ortiz, J Simpson, CA Langner, PJ Baker, C Aguilar, K Brooks, ... Scientific Reports 12 (1), 7491, 2022 | 9 | 2022 |
| I’ve looked at gut from both sides now: Gastrointestinal tract involvement in the pathogenesis of SARS-CoV-2 and HIV/SIV infections I Pandrea, K Brooks, RP Desai, M Tare, JM Brenchley, C Apetrei Frontiers in Immunology 13, 899559, 2022 | 7 | 2022 |
| Proviral turnover during untreated HIV infection is dynamic and variable between hosts, impacting reservoir composition on ART K Brooks, FH Omondi, RH Liang, H Sudderuddin, BR Jones, JB Joy, ... Frontiers in microbiology 12, 719153, 2021 | 7 | 2021 |
| IL-10 suppresses T cell expansion while promoting tissue-resident memory cell formation during SARS-CoV-2 infection in rhesus macaques CE Nelson, TW Foreman, ER Fukutani, KD Kauffman, S Sakai, JD Fleegle, ... PLoS Pathogens 20 (7), e1012339, 2024 | 6 | 2024 |
| Recombinant OC43 SARS-CoV-2 spike replacement virus: An improved BSL-2 proxy virus for SARS-CoV-2 neutralization assays Z Hu, AD López-Muñoz, I Kosik, T Li, V Callahan, K Brooks, DS Yee, ... Proceedings of the National Academy of Sciences 121 (29), e2310421121, 2024 | 4 | 2024 |
| HIV-1 Gag-Pol Sequences from Ugandan Early Infections Reveal Sequence Variants Associated with Elevated Replication Capacity A Kapaata, SN Balinda, R Xu, MG Salazar, K Herard, K Brooks, K Laban, ... Viruses 13 (2), 171, 2021 | 2 | 2021 |
| Exacerbation of CMV and Nontuberculous Mycobacterial Infections Following PD-1 Blockade for HIV-Associated Kaposi Sarcoma IU Anidi, S Sakai, K Brooks, SP Fling, MJ Wagner, K Lurain, ... Open Forum Infectious Diseases 11 (5), ofae183, 2024 | 1 | 2024 |
| SARS-CoV-2 infection perturbs the gastrointestinal tract and induces modest microbial translocation across the intestinal barrier K Brooks, CE Nelson, C Aguilar, TN Hoang, AM Ortiz, CA Langner, ... Journal of Virology, e01288-24, 2024 | | 2024 |
| Translocating bacteria in SIV infection are not stochastic and preferentially express cytosine methyltransferases JK Flynn, AM Ortiz, I Vujkovic-Cvijin, HC Welles, J Simpson, FMC Casta, ... Mucosal immunology, 2024 | | 2024 |
| 2-Hydroxypropyl-β-Cyclodextrin Treatment Induces Modest Immune Activation in Healthy Rhesus Macaques AM Ortiz, F Castello Casta, A Rahmberg, TE Markowitz, K Brooks, ... Journal of Virology 97 (7), e00600-23, 2023 | | 2023 |
| IL-10 promotes tissue-resident memory T cells (T RM) in the respiratory tract during SARS-CoV-2 infection in rhesus macaques C Nelson, T Foreman, S Namasivayam, K Kauffman, F Gomez, S Sakai, ... The Journal of Immunology 210 (1_Supplement), 75.05-75.05, 2023 | | 2023 |
| Increased frequency of inter-subtype HIV-1 recombinants identified by near full-length virus sequencing in a Rwanda acute heterosexual transmission cohort L Yue, G Umviligihozo, E Muok, R Xu, D Dilernia, K Herard, K Brooks, ... JOURNAL OF THE INTERNATIONAL AIDS SOCIETY 24, 2021 | | 2021 |
| HIV-1 Reservoir Formation in the Context of Pre-antiretroviral Therapy Infection K Brooks Emory University, 2020 | | 2020 |
| Transmitted/Founder Virus-like Variants Are Archived in the Reservoir K Brooks, D Dilernia, D Wilkins, D Claiborne, S McInally, E Hunter AIDS RESEARCH AND HUMAN RETROVIRUSES 34, 84-84, 2018 | | 2018 |
| Diversity of HIV-1 Proviral Sequences During Antiretroviral Treatment from Transmitted Variants K Brooks, D Dilernia, D Wilkins, W Kilembe, D Claiborne, S Allen, ... AIDS RESEARCH AND HUMAN RETROVIRUSES 32, 271-271, 2016 | | 2016 |
