Amyloid oligomers: A joint experimental/computational perspective on Alzheimer’s disease, Parkinson’s disease, type II diabetes, and amyotrophic lateral sclerosis PH Nguyen, A Ramamoorthy, BR Sahoo, J Zheng, P Faller, JE Straub, ... Chemical Reviews 121 (4), 2545-2647, 2021 | 494 | 2021 |
Autodock Vina Adopts more Accurate Binding Poses but Autodock4 Forms better Binding Affinity NT Nguyen, TH Nguyen, TNH Pham, NT Huy, MV Bay, MQ Pham, ... Journal of Chemical Information and Modeling 60 (1), 204-211, 2020 | 317 | 2020 |
Inhibition of Aggregation of Amyloid Peptides by Beta-Sheet Breaker Peptides and Their Binding Affinity MH Viet, ST Ngo, NS Lam, MS Li The Journal of Physical Chemistry B 115 (22), 7433-7446, 2011 | 207 | 2011 |
Computational Determination of Potential Inhibitors of SARS-CoV-2 Main Protease ST Ngo, N Quynh Anh Pham, L Thi Le, DH Pham, VV Vu Journal of Chemical Information and Modeling 60 (12), 5771-5780, 2020 | 133 | 2020 |
Nano-plastics and their analytical characterisation and fate in the marine environment: From source to sea S Gangadoo, S Owen, P Rajapaksha, K Plaisted, S Cheeseman, ... Science of the Total Environment 732, 138792, 2020 | 130 | 2020 |
Curcumin Binds to Aβ1–40 Peptides and Fibrils Stronger Than Ibuprofen and Naproxen ST Ngo, MS Li The Journal of Physical Chemistry B 116 (34), 10165-10175, 2012 | 100 | 2012 |
Effect of the Tottori Familial Disease Mutation (D7N) on the Monomers and Dimers of Aβ40 and Aβ42 MH Viet, PH Nguyen, ST Ngo, MS Li, P Derreumaux ACS Chemical Neuroscience 4 (11), 1446-1457, 2013 | 92 | 2013 |
Benchmark of Popular Free Energy Approaches Revealing the Inhibitors Binding to SARS-CoV-2 Mpro ST Ngo, NM Tam, PM Quan, TH Nguyen Journal of Chemical Information and Modeling 61 (5), 2302-2312, 2021 | 75 | 2021 |
Fast and Accurate Determination of the Relative Binding Affinities of Small Compounds to HIV‐1 Protease using Non‐Equilibrium Work ST Ngo, HM Hung, MT Nguyen Journal of Computational Chemistry 37 (31), 2734-2742, 2016 | 70 | 2016 |
Top-leads from Natural Products for Treatment of Alzheimer's Disease: Docking and Molecular Dynamics Study ST Ngo, MS Li Molecular Simulation 39 (4), 279-291, 2013 | 69 | 2013 |
Tetrameric Aβ40 and Aβ42 β-Barrel Structures by Extensive Atomistic Simulations. II. In Aqueous Solution. PH Nguyen, JM Campanera, ST Ngo, A Loquet, P Derreumaux The Journal of Physical Chemistry B 123 (31), 6750-6756, 2019 | 64 | 2019 |
Copper Active Site in Polysaccharide Monooxygenases VV Vu, ST Ngo Coordination Chemistry Reviews 368, 134-157, 2018 | 64 | 2018 |
Effective Estimation of Ligand Binding Affinity using Biased Sampling Method ST Ngo, KB Vu, LM Bui, VV Vu ACS Omega 4, 3887-3893, 2019 | 57 | 2019 |
In silico and in vitro Characterization of Anti-Amyloidogenic Activity of Vitamin K3 Analogues for Alzheimer's Disease PDQ Huy, YC Yu, ST Ngo, T Van Thao, C Chen, MS Li, YC Chen Biochimica et Biophysica Acta (BBA)-General Subjects 1830 (4), 2960-2969, 2013 | 51 | 2013 |
EGCG Inhibits the Oligomerization of Amyloid Beta (16-22) Hexamer: Theoretical Studies ST Ngo, DT Truong, NM Tam, MT Nguyen Journal of Molecular Graphics and Modelling 76, 1-10, 2017 | 46 | 2017 |
Anti-arrhythmic Medication Propafenone a Potential Drug for Alzheimer’s Disease Inhibiting Aggregation of Aβ: In Silico and in Vitro Studies ST Ngo, ST Fang, SH Huang, CL Chou, PDQ Huy, MS Li, YC Chen Journal of Chemical Information and Modeling 56 (7), 1344-1356, 2016 | 42 | 2016 |
Rapid prediction of possible inhibitors for SARS-CoV-2 main protease using docking and FPL simulations MQ Pham, KB Vu, TNH Pham, LH Tran, NT Tung, VV Vu, TH Nguyen, ... RSC Advances 10 (53), 31991-31996, 2020 | 41 | 2020 |
Substrate selectivity in starch polysaccharide monooxygenases VV Vu, JA Hangasky, TC Detomasi, SJW Henry, ST Ngo, EA Span, ... Journal of Biological Chemistry 294 (32), 12157-12166, 2019 | 40 | 2019 |
Replica Exchange Molecular Dynamics Study of the Amyloid Beta (11–40) Trimer Penetrating a Membrane ST Ngo, HM Hung, KN Tran, MT Nguyen RSC Advances 7 (12), 7346-7357, 2017 | 40 | 2017 |
Oversampling Free Energy Perturbation Simulation in Determination of the Ligand‐Binding Free Energy ST Ngo, TH Nguyen, NT Tung, PC Nam, KB Vu, VV Vu Journal of Computational Chemistry 41 (7), 611-618, 2020 | 37 | 2020 |