Impact of oxidative lesions on the human telomeric G-quadruplex S Bielskutė, J Plavec, P Podbevšek Journal of the American Chemical Society 141 (6), 2594-2603, 2019 | 76 | 2019 |
Effects of metal ions and cosolutes on G-quadruplex topology T Fujii, P Podbevšek, J Plavec, N Sugimoto Journal of Inorganic Biochemistry 166, 190-198, 2017 | 69 | 2017 |
NMR evaluation of ammonium ion movement within a unimolecular G-quadruplex in solution P Podbevšek, NV Hud, J Plavec Nucleic acids research 35 (8), 2554-2563, 2007 | 61 | 2007 |
Recovery of the formation and function of oxidized G-quadruplexes by a pyrene-modified guanine tract S Takahashi, KT Kim, P Podbevšek, J Plavec, BH Kim, N Sugimoto Journal of the American Chemical Society 140 (17), 5774-5783, 2018 | 50 | 2018 |
Structural determinants of the SINE B2 element embedded in the long non-coding RNA activator of translation AS Uchl1 P Podbevšek, F Fasolo, C Bon, L Cimatti, S Reißer, P Carninci, G Bussi, ... Scientific reports 8 (1), 3189, 2018 | 37 | 2018 |
Identification and characterization of second-generation invader locked nucleic acids (LNAs) for mixed-sequence recognition of double-stranded DNA SP Sau, AS Madsen, P Podbevsek, NK Andersen, TS Kumar, S Andersen, ... The Journal of organic chemistry 78 (19), 9560-9570, 2013 | 37 | 2013 |
Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides M Kovačič, P Podbevšek, H Tateishi-Karimata, S Takahashi, N Sugimoto, ... Nucleic Acids Research 48 (7), 3975-3986, 2020 | 33 | 2020 |
Stacking and Not Solely Topology of T3 Loops Controls Rigidity and Ammonium Ion Movement within d(G4T3G4)2 G-Quadruplex P Podbevsek, P Sket, J Plavec Journal of the American Chemical Society 130 (43), 14287-14293, 2008 | 32 | 2008 |
KRAS promoter oligonucleotide with decoy activity dimerizes into a unique topology consisting of two G-quadruplex units P Podbevšek, J Plavec Nucleic acids research 44 (2), 917-925, 2016 | 28 | 2016 |
Newly characterized interaction stabilizes DNA structure: oligoethylene glycols stabilize G-quadruplexes CH–π interactions H Tateishi-Karimata, T Ohyama, T Muraoka, P Podbevsek, AM Wawro, ... Nucleic acids research 45 (12), 7021-7030, 2017 | 27 | 2017 |
Solution-state structure of a fully alternately 2′-F/2′-OMe modified 42-nt dimeric siRNA construct P Podbevsek, CR Allerson, B Bhat, J Plavec Nucleic acids research 38 (20), 7298-7307, 2010 | 22 | 2010 |
Oxidative lesions modulate G-quadruplex stability and structure in the human BCL2 promoter S Bielskutė, J Plavec, P Podbevšek Nucleic Acids Research 49 (4), 2346-2356, 2021 | 21 | 2021 |
Observation of Water Molecules within the Bimolecular d(G3CT4G3C)2 G-Quadruplex J Zavasnik, P Podbevsek, J Plavec Biochemistry 50 (19), 4155-4161, 2011 | 19 | 2011 |
NMR Study of Ammonium Ion Binding to d [G3 T 4 G 4] 2 and d [G 4 (T 4 G 4) 3] G-Quadruplexes P Podbevšek, P Šket, J Plavec Nucleosides, Nucleotides, and Nucleic Acids 26 (10-12), 1547-1551, 2007 | 15 | 2007 |
4D Non-uniformly sampled C,C-NOESY experiment for sequential assignment of 13C,15N-labeled RNAs J Stanek, P Podbevšek, W Koźmiński, J Plavec, M Cevec Journal of biomolecular NMR 57, 1-9, 2013 | 12 | 2013 |
The subgenomic promoter of brome mosaic virus folds into a stem–loop structure capped by a pseudo-triloop that is structurally similar to the triloop of the genomic promoter J Skov, M Gaudin, P Podbevšek, RCL Olsthoorn, M Petersen Rna 18 (5), 992-1000, 2012 | 12 | 2012 |
Transcriptome screening followed by integrated physicochemical and structural analyses for investigating RNA-mediated berberine activity S Satpathi, T Endoh, P Podbevšek, J Plavec, N Sugimoto Nucleic acids research 49 (15), 8449-8461, 2021 | 11 | 2021 |
Small circular interfering RNAs (sciRNAs) as a potent therapeutic platform for gene-silencing H Jahns, R Degaonkar, P Podbevsek, S Gupta, A Bisbe, K Aluri, J Szeto, ... Nucleic Acids Research 49 (18), 10250-10264, 2021 | 10 | 2021 |
The structural duality of nucleobases in guanine quadruplexes controls their low-energy photoionization E Balanikas, L Martinez-Fernandez, R Improta, P Podbevsek, ... The Journal of Physical Chemistry Letters 12 (34), 8309-8313, 2021 | 10 | 2021 |
c-kit2 G-quadruplex stabilized via a covalent probe: exploring G-quartet asymmetry K Peterková, I Durník, R Marek, J Plavec, P Podbevšek Nucleic Acids Research 49 (15), 8947-8960, 2021 | 6 | 2021 |