| Martini coarse-grained force field: extension to carbohydrates CA López, AJ Rzepiela, AH de Vries, L Dijkhuizen, PH Hünenberger, ... Journal of Chemical Theory and Computation 5 (12), 3195-3210, 2009 | 462 | 2009 |
| Efficient Algorithms for Langevin and DPD Dynamics N Goga, AJ Rzepiela, AH de Vries, SJ Marrink, HJC Berendsen J. Chem. Theory Comput, 2012 | 304 | 2012 |
| Lipid packing drives the segregation of transmembrane helices into disordered lipid domains in model membranes LV Schäfer, DH de Jong, A Holt, AJ Rzepiela, AH de Vries, B Poolman, ... Proceedings of the National Academy of Sciences 108 (4), 1343-1348, 2011 | 270 | 2011 |
| Reconstruction of atomistic details from coarse‐grained structures AJ Rzepiela, LV Schäfer, N Goga, HJ Risselada, AH De Vries, SJ Marrink Journal of computational chemistry 31 (6), 1333-1343, 2010 | 224 | 2010 |
| Hybrid simulations: combining atomistic and coarse-grained force fields using virtual sites AJ Rzepiela, M Louhivuori, C Peter, SJ Marrink Physical Chemistry Chemical Physics 13 (22), 10437-10448, 2011 | 213 | 2011 |
| Membrane poration by antimicrobial peptides combining atomistic and coarse-grained descriptions AJ Rzepiela, D Sengupta, N Goga, SJ Marrink Faraday discussions 144, 431-443, 2010 | 152 | 2010 |
| Bidirectional propagation of signals and nutrients in fungal networks via specialized hyphae SS Schmieder, CE Stanley, A Rzepiela, D van Swaay, J Sabotič, ... Current Biology 29 (2), 217-228. e4, 2019 | 70 | 2019 |
| VEGF-A regulates cellular localization of SR-BI as well as transendothelial transport of HDL but not LDL S Velagapudi, M Yalcinkaya, A Piemontese, R Meier, SF Nørrelykke, ... Arteriosclerosis, thrombosis, and vascular biology 37 (5), 794-803, 2017 | 48 | 2017 |
| Benchmark of schemes for multiscale molecular dynamics simulations N Goga, MN Melo, AJ Rzepiela, AH De Vries, A Hadar, SJ Marrink, ... Journal of Chemical Theory and Computation 11 (4), 1389-1398, 2015 | 27 | 2015 |
| Single‐cell mRNA profiling reveals the hierarchical response of mi RNA targets to mi RNA induction AJ Rzepiela, S Ghosh, J Breda, A Vina‐Vilaseca, AP Syed, AJ Gruber, ... Molecular systems biology 14 (8), e8266, 2018 | 25 | 2018 |
| Quantifying the strength of miRNA–target interactions J Breda, AJ Rzepiela, R Gumienny, E van Nimwegen, M Zavolan Methods 85, 90-99, 2015 | 24 | 2015 |
| High-resolution cryoelectron microscopy structure of the cyclic nucleotide-modulated potassium channel MloK1 in a lipid bilayer J Kowal, N Biyani, M Chami, S Scherer, AJ Rzepiela, P Baumgartner, ... Structure 26 (1), 20-27. e3, 2018 | 23 | 2018 |
| Data driven Langevin modeling of biomolecular dynamics N Schaudinnus, AJ Rzepiela, R Hegger, G Stock The Journal of Chemical Physics 138 (20), 2013 | 15 | 2013 |
| Posttranscriptional regulation of the human LDL receptor by the U2-Spliceosome P Zanoni, G Panteloglou, A Othman, JT Haas, R Meier, A Rimbert, ... Circulation research 130 (1), 80-95, 2022 | 10 | 2022 |
| Microsecond peptide dynamics from nanosecond trajectories: A Langevin approach AJ Rzepiela, N Schaudinnus, S Buchenberg, R Hegger, G Stock J. Chem. Phys. 141, 2014 | 9 | 2014 |
| Loss of TSC complex enhances gluconeogenesis via upregulation of Dlk1-Dio3 locus miRNAs MNH Dritan Liko, Andrzej Rzepiela, Vanja Vukojevic, Mihaela Zavolan Proceedings of the National Academy of Sciences, 2020 | 8 | 2020 |
| Methods for multiscale modeling of membranes N Goga, A Rzepiela, MN Melo, AH de Vries, A Hadar, AJ Markvoort, ... Advances in Planar Lipid Bilayers and Liposomes 15, 139-170, 2012 | 7 | 2012 |
| Iron-carbohydrate complexes treating iron anaemia: Understanding the nano-structure and interactions with proteins through orthogonal characterisation L Krupnik, J Avaro, M Liebi, NI Anaraki, J Kohlbrecher, A Sologubenko, ... Journal of Controlled Release 368, 566-579, 2024 | 1 | 2024 |
| Image quality measurements and denoising using Fourier Ring Correlations J Kaczmar-Michalska, NR Hajizadeh, AJ Rzepiela, SF Nørrelykke arXiv preprint arXiv:2201.03992, 2022 | 1 | 2022 |
| Exploiting variability of single cells to uncover the in vivo hierarchy of miRNA targets AJ Rzepiela, A Vina-Vilaseca, J Breda, S Ghosh, AP Syed, AJ Gruber, ... bioRxiv, 035097, 2015 | 1 | 2015 |
Siewert J. MarrinkProfessor of Molecular Dynamics, University of Groningen在 rug.nl 的电子邮件经过验证
