Electrostatics of nanosystems: application to microtubules and the ribosome NA Baker, D Sept, S Joseph, MJ Holst, JA McCammon Proceedings of the National Academy of Sciences 98 (18), 10037-10041, 2001 | 8071 | 2001 |
Green's functions and boundary value problems I Stakgold, MJ Holst John Wiley & Sons, 2011 | 2158 | 2011 |
Improvements to the APBS biomolecular solvation software suite E Jurrus, D Engel, K Star, K Monson, J Brandi, LE Felberg, DH Brookes, ... Protein Science 27 (1), 112-128, 2018 | 1625 | 2018 |
Multigrid solution of the Poisson–Boltzmann equation M Holst, F Saied Journal of computational chemistry 14 (1), 105-113, 1993 | 389 | 1993 |
Adaptive multilevel finite element solution of the Poisson–Boltzmann equation I. Algorithms and examples M Holst, N Baker, F Wang Journal of computational chemistry 21 (15), 1319-1342, 2000 | 378 | 2000 |
Recent progress in numerical methods for the Poisson–Boltzmann equation in biophysical applications BZ Lu, YC Zhou, MJ Holst, JA McCammon Commun Comput Phys 3 (5), 973-1009, 2008 | 355 | 2008 |
Numerical solution of the nonlinear Poisson–Boltzmann equation: developing more robust and efficient methods MJ Holst, F Saied Journal of computational chemistry 16 (3), 337-364, 1995 | 306 | 1995 |
Three-dimensional electron microscopy reveals new details of membrane systems for Ca2+ signaling in the heart T Hayashi, ME Martone, Z Yu, A Thor, M Doi, MJ Holst, MH Ellisman, ... Journal of cell science 122 (7), 1005-1013, 2009 | 282 | 2009 |
Adaptive multilevel finite element solution of the Poisson–Boltzmann equation II. Refinement at solvent‐accessible surfaces in biomolecular systems N Baker, M Holst, F Wang Journal of computational chemistry 21 (15), 1343-1352, 2000 | 267 | 2000 |
The finite element approximation of the nonlinear Poisson–Boltzmann equation L Chen, MJ Holst, J Xu SIAM journal on numerical analysis 45 (6), 2298-2320, 2007 | 201 | 2007 |
Poisson–Nernst–Planck equations for simulating biomolecular diffusion–reaction processes I: Finite element solutions B Lu, MJ Holst, JA McCammon, YC Zhou Journal of computational physics 229 (19), 6979-6994, 2010 | 186 | 2010 |
Multilevel methods for the Poisson–Boltzmann equation MJ Holst Ph. D. Thesis, 1993 | 185* | 1993 |
Adaptive numerical treatment of elliptic systems on manifolds M Holst Advances in Computational Mathematics 15 (1), 139-191, 2001 | 176 | 2001 |
The adaptive multilevel finite element solution of the Poisson–Boltzmann equation on massively parallel computers NA Baker, D Sept, MJ Holst, JA McCammon IBM Journal of Research and Development 45 (3.4), 427-438, 2001 | 159 | 2001 |
A new paradigm for parallel adaptive meshing algorithms RE Bank, M Holst SIAM Journal on Scientific Computing 22 (4), 1411-1443, 2000 | 144 | 2000 |
Treatment of electrostatic effects in proteins: Multigrid–based newton iterative method for solution of the full nonlinear Poisson–Boltzmann equation M Holst, RE Kozack, F Saied, S Subramaniam Proteins: Structure, Function, and Bioinformatics 18 (3), 231-245, 1994 | 127 | 1994 |
A new paradigm for parallel adaptive meshing algorithms RE Bank, M Holst SIAM review 45 (2), 291-323, 2003 | 120 | 2003 |
Feature–preserving adaptive mesh generation for molecular shape modeling and simulation Z Yu, MJ Holst, Y Cheng, JA McCammon Journal of Molecular Graphics and Modelling 26 (8), 1370-1380, 2008 | 110 | 2008 |
Convergence and optimality of adaptive mixed finite element methods L Chen, M Holst, J Xu Mathematics of Computation 78 (265), 35-53, 2009 | 109 | 2009 |
Efficient mesh optimization schemes based on optimal Delaunay triangulations L Chen, M Holst Computer Methods in Applied Mechanics and Engineering 200 (9-12), 967-984, 2011 | 105 | 2011 |