| Interrogating the Escherichia coli cell cycle by cell dimension perturbations H Zheng, PY Ho, M Jiang, B Tang, W Liu, D Li, X Yu, NE Kleckner, A Amir, ... Proceedings of the National Academy of Sciences 113 (52), 15000-15005, 2016 | 150 | 2016 |
| Design, construction, and in vivo augmentation of a complex gut microbiome AG Cheng, PY Ho, A Aranda-Díaz, S Jain, BY Feiqiao, X Meng, M Wang, ... Cell 185 (19), 3617-3636. e19, 2022 | 132 | 2022 |
| Simultaneous regulation of cell size and chromosome replication in bacteria PY Ho, A Amir Frontiers in microbiology 6, 662, 2015 | 118 | 2015 |
| Archaeal cells share common size control with bacteria despite noisier growth and division YJ Eun, PY Ho, M Kim, S LaRussa, L Robert, LD Renner, A Schmid, ... Nature microbiology 3 (2), 148-154, 2018 | 86 | 2018 |
| Modeling cell size regulation: From single-cell-level statistics to molecular mechanisms and population-level effects PY Ho, J Lin, A Amir Annual review of biophysics 47 (1), 251-271, 2018 | 84 | 2018 |
| A parallel adder coordinates mycobacterial cell-cycle progression and cell-size homeostasis in the context of asymmetric growth and organization MM Logsdon, PY Ho, K Papavinasasundaram, K Richardson, M Cokol, ... Current Biology 27 (21), 3367-3374. e7, 2017 | 67 | 2017 |
| Competition for fluctuating resources reproduces statistics of species abundance over time across wide-ranging microbiotas PY Ho, BH Good, KC Huang Elife 11, e75168, 2022 | 45 | 2022 |
| Details matter: noise and model structure set the relationship between cell size and cell cycle timing F Barber, PY Ho, AW Murray, A Amir Frontiers in cell and developmental biology 5, 92, 2017 | 27 | 2017 |
| Calibrated Langevin-dynamics simulations of intrinsically disordered proteins WW Smith, PY Ho, CS O'Hern Physical Review E 90 (4), 042709, 2014 | 23 | 2014 |
| Resource competition predicts assembly of in vitro gut bacterial communities PY Ho, TH Nguyen, JM Sanchez, BC DeFelice, KC Huang bioRxiv, 2022.05. 30.494065, 2022 | 15 | 2022 |
| Assembly of gut-derived bacterial communities follows “early-bird” resource utilization dynamics A Aranda-Díaz, L Willis, TH Nguyen, PY Ho, J Vila, T Thomsen, T Chavez, ... bioRxiv, 2023.01. 13.523996, 2023 | 11 | 2023 |
| Modulation of antibiotic effects on microbial communities by resource competition DP Newton, PY Ho, KC Huang Nature Communications 14 (1), 2398, 2023 | 10 | 2023 |
| Resource competition predicts assembly of gut bacterial communities in vitro PY Ho, TH Nguyen, JM Sanchez, BC DeFelice, KC Huang Nature Microbiology 9 (4), 1036-1048, 2024 | 5 | 2024 |
| A mechanistic model of the regulation of division timing by the circadian clock in cyanobacteria PY Ho, BMC Martins, A Amir Biophysical Journal 118 (12), 2905-2913, 2020 | 4 | 2020 |
| Nutrient competition predicts gut microbiome restructuring under drug perturbations H Shi, DP Newton, TH Nguyen, S Estrela, J Sanchez, M Tu, PY Ho, ... bioRxiv, 2024.08. 06.606863, 2024 | | 2024 |
| Challenges in quantifying functional redundancy and selection in microbial communities PY Ho, K Huang bioRxiv, 2024.03. 26.586891, 2024 | | 2024 |
| Models of microbial cell cycles PY Ho Harvard University, 2019 | | 2019 |
