| Oct4 and LIF/Stat3 additively induce Krüppel factors to sustain embryonic stem cell self-renewal J Hall, G Guo, J Wray, I Eyres, J Nichols, L Grotewold, S Morfopoulou, ... Cell stem cell 5 (6), 597-609, 2009 | 452 | 2009 |
| Human coronavirus OC43 associated with fatal encephalitis S Morfopoulou, JR Brown, EG Davies, G Anderson, A Virasami, W Qasim, ... New England Journal of Medicine 375 (5), 497-498, 2016 | 335 | 2016 |
| Human IFNAR2 deficiency: Lessons for antiviral immunity CJA Duncan, SMB Mohamad, DF Young, AJ Skelton, TR Leahy, ... Science translational medicine 7 (307), 307ra154-307ra154, 2015 | 231 | 2015 |
| Astrovirus VA1/HMO-C: an increasingly recognized neurotropic pathogen in immunocompromised patients JR Brown, S Morfopoulou, J Hubb, WA Emmett, W Ip, D Shah, T Brooks, ... Clinical Infectious Diseases 60 (6), 881-888, 2015 | 204 | 2015 |
| Genomic investigations of unexplained acute hepatitis in children S Morfopoulou, S Buddle, OET Montaguth, L Atkinson, ... Nature, 1-2, 2023 | 101 | 2023 |
| An emerging opportunistic infection: fatal astrovirus (VA 1/HMO‐C) encephalitis in a pediatric stem cell transplant recipient SH Lum, A Turner, M Guiver, D Bonney, T Martland, E Davies, ... Transplant Infectious Disease 18 (6), 960-964, 2016 | 86 | 2016 |
| Deep sequencing reveals persistence of cell-associated mumps vaccine virus in chronic encephalitis S Morfopoulou, ET Mee, SM Connaughton, JR Brown, K Gilmour, ... Acta Neuropathologica 133, 139-147, 2017 | 50 | 2017 |
| Use of whole-genome sequencing of adenovirus in immunocompromised pediatric patients to identify nosocomial transmission and mixed-genotype infection CJ Houldcroft, S Roy, S Morfopoulou, BK Margetts, DP Depledge, ... The Journal of Infectious Diseases 218 (8), 1261-1271, 2018 | 49 | 2018 |
| STROBE-metagenomics: a STROBE extension statement to guide the reporting of metagenomics studies T Bharucha, C Oeser, F Balloux, JR Brown, EC Carbo, A Charlett, ... The Lancet Infectious Diseases 20 (10), e251-e260, 2020 | 48 | 2020 |
| Benchmark of thirteen bioinformatic pipelines for metagenomic virus diagnostics using datasets from clinical samples JJC de Vries, JR Brown, N Fischer, IA Sidorov, S Morfopoulou, J Huang, ... Journal of Clinical Virology 141, 104908, 2021 | 39 | 2021 |
| Bayesian mixture analysis for metagenomic community profiling S Morfopoulou, V Plagnol Bioinformatics 31 (18), 2930-2938, 2015 | 36 | 2015 |
| Mixed cytomegalovirus genotypes in HIV-positive mothers show compartmentalization and distinct patterns of transmission to infants J Pang, JA Slyker, S Roy, J Bryant, C Atkinson, J Cudini, C Farquhar, ... Elife 9, e63199, 2020 | 21 | 2020 |
| Novel human embryonic stem cell regulators identified by conserved and distinct CpG island methylation state S Pells, E Koutsouraki, S Morfopoulou, S Valencia-Cadavid, ... PLoS One 10 (7), e0131102, 2015 | 18 | 2015 |
| The influence of human genetic variation on Epstein–Barr virus sequence diversity S Rüeger, C Hammer, A Loetscher, PJ McLaren, D Lawless, O Naret, ... Scientific reports 11 (1), 4586, 2021 | 11 | 2021 |
| Epstein–Barr virus (EBV) deletions as biomarkers of response to treatment of chronic active EBV C Venturini, CJ Houldcroft, A Lazareva, F Wegner, S Morfopoulou, ... British Journal of Haematology 195 (2), 249-255, 2021 | 9 | 2021 |
| Metagenomic analysis of a blood stain from the French revolutionary Jean-Paul Marat (1743–1793) T De-Dios, L van Dorp, P Charlier, S Morfopoulou, E Lizano, C Bon, ... Infection, Genetics and Evolution 80, 104209, 2020 | 6 | 2020 |
| Untargeted metagenomics protocol for the diagnosis of infection from CSF and tissue from sterile sites L Atkinson, JCD Lee, A Lennon, D Shah, N Storey, S Morfopoulou, ... Heliyon 9 (9), 2023 | 4 | 2023 |
| Translating metagenomics into clinical practice for complex paediatric neurological presentations J Penner, J Hassell, JR Brown, K Mankad, N Storey, L Atkinson, ... Journal of Infection 87 (5), 451-458, 2023 | 3 | 2023 |
| Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses S Buddle, L Forrest, N Akinsuyi, LMM Bernal, T Brooks, C Venturini, ... medRxiv, 2024.03. 28.24304905, 2024 | | 2024 |
| Clinical metagenomics for detection of viruses using short-read, long-read and targeted approaches S Buddle, L Forrest, N Akinsuyi, MB LM, T Brooks, C Venturini, C Miller, ... | | 2024 |
