Gap-sensitive colinear chaining algorithms for acyclic pangenome graphs G Chandra, C Jain Journal of Computational Biology 30 (11), 1182-1197, 2023 | 18* | 2023 |
Co-linear chaining on pangenome graphs J Rajput, G Chandra, C Jain Algorithms for Molecular Biology 19 (1), 4, 2024 | 8 | 2024 |
Haplotype-aware sequence alignment to pangenome graphs G Chandra, D Gibney, C Jain International Conference on Research in Computational Molecular Biology, 381-384, 2024 | 3 | 2024 |
Accelerating whole-genome alignment in the age of complete genome assemblies G Chandra, M Vasimuddin, S Misra, C Jain bioRxiv, 2024.11. 25.625328, 2024 | | 2024 |
Integer programming framework for pangenome-based genome inference G Chandra, MH Hossen, S Scholz, AT Dilthey, D Gibney, C Jain bioRxiv, 2024.10. 27.620212, 2024 | | 2024 |