| Multiple early factors anticipate post-acute COVID-19 sequelae Y Su, D Yuan, DG Chen, RH Ng, K Wang, J Choi, S Li, S Hong, R Zhang, ... Cell 185 (5), 881-895. e20, 2022 | 866 | 2022 |
| A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS M Bellew, M Coram, M Fitzgibbon, M Igra, T Randolph, P Wang, D May, ... Bioinformatics 22 (15), 1902-1909, 2006 | 325 | 2006 |
| Magnitude and dynamics of the T-cell response to SARS-CoV-2 infection at both individual and population levels TM Snyder, RM Gittelman, M Klinger, DH May, EJ Osborne, R Taniguchi, ... MedRxiv, 2020 | 191 | 2020 |
| Statistical inference from multiple iTRAQ experiments without using common reference standards SM Herbrich, RN Cole, KP West Jr, K Schulze, JD Yager, JD Groopman, ... Journal of proteome research 12 (2), 594-604, 2013 | 137 | 2013 |
| Protein alterations associated with pancreatic cancer and chronic pancreatitis found in human plasma using global quantitative proteomics profiling S Pan, R Chen, DA Crispin, D May, T Stevens, MW McIntosh, MP Bronner, ... Journal of proteome research 10 (5), 2359-2376, 2011 | 132 | 2011 |
| Quantitative glycoproteomics analysis reveals changes in N-glycosylation level associated with pancreatic ductal adenocarcinoma S Pan, R Chen, Y Tamura, DA Crispin, LA Lai, DH May, MW McIntosh, ... Journal of proteome research 13 (3), 1293-1306, 2014 | 115 | 2014 |
| A platform for accurate mass and time analyses of mass spectrometry data D May, M Fitzgibbon, Y Liu, T Holzman, J Eng, CJ Kemp, J Whiteaker, ... Journal of proteome research 6 (7), 2685-2694, 2007 | 102 | 2007 |
| Brain-specific proteins decline in the cerebrospinal fluid of humans with Huntington disease Q Fang, A Strand, W Law, VM Faca, MP Fitzgibbon, N Hamel, B Houle, ... Molecular & Cellular Proteomics 8 (3), 451-466, 2009 | 100 | 2009 |
| MRMer, an interactive open source and cross-platform system for data extraction and visualization of multiple reaction monitoring experiments DB Martin, T Holzman, D May, A Peterson, A Eastham, J Eng, M McIntosh Molecular & Cellular Proteomics 7 (11), 2270-2278, 2008 | 97 | 2008 |
| Critical decisions in metaproteomics: achieving high confidence protein annotations in a sea of unknowns E Timmins-Schiffman, DH May, M Mikan, M Riffle, C Frazar, HR Harvey, ... The ISME journal 11 (2), 309-314, 2017 | 75 | 2017 |
| Metabolomic profiling of urine: response to a randomised, controlled feeding study of select fruits and vegetables, and application to an observational study DH May, SL Navarro, I Ruczinski, J Hogan, Y Ogata, Y Schwarz, L Levy, ... British journal of nutrition 110 (10), 1760-1770, 2013 | 75 | 2013 |
| Proteins associated with pancreatic cancer survival in patients with resectable pancreatic ductal adenocarcinoma R Chen, DW Dawson, S Pan, NA Ottenhof, RF De Wilde, CL Wolfgang, ... Laboratory investigation 95 (1), 43-55, 2015 | 71 | 2015 |
| MetaGOmics: a web-based tool for peptide-centric functional and taxonomic analysis of metaproteomics data M Riffle, DH May, E Timmins-Schiffman, MP Mikan, D Jaschob, WS Noble, ... Proteomes 6 (1), 2, 2017 | 59 | 2017 |
| Screening, large-scale production and structure-based classification of cystine-dense peptides CE Correnti, MM Gewe, C Mehlin, AD Bandaranayake, WA Johnsen, ... Nature structural & molecular biology 25 (3), 270-278, 2018 | 57 | 2018 |
| Proteomics portrait of archival lesions of chronic pancreatitis S Pan, R Chen, T Stevens, MP Bronner, D May, Y Tamura, MW McIntosh, ... PloS one 6 (11), e27574, 2011 | 55 | 2011 |
| An alignment-free “metapeptide” strategy for metaproteomic characterization of microbiome samples using shotgun metagenomic sequencing DH May, E Timmins-Schiffman, MP Mikan, HR Harvey, E Borenstein, ... Journal of proteome research 15 (8), 2697-2705, 2016 | 51 | 2016 |
| Investigating neoplastic progression of ulcerative colitis with label-free comparative proteomics D May, S Pan, DA Crispin, K Lai, MP Bronner, J Hogan, DM Hockenbery, ... Journal of proteome research 10 (1), 200-209, 2011 | 51 | 2011 |
| Disseminating metaproteomic informatics capabilities and knowledge using the Galaxy-P framework C Blank, C Easterly, B Gruening, J Johnson, CA Kolmeder, P Kumar, ... Proteomes 6 (1), 7, 2018 | 45 | 2018 |
| A learned embedding for efficient joint analysis of millions of mass spectra W Bittremieux, DH May, J Bilmes, WS Noble Nature methods 19 (6), 675-678, 2022 | 37 | 2022 |
| Param-Medic: A tool for improving MS/MS database search yield by optimizing parameter settings DH May, K Tamura, WS Noble Journal of proteome research 16 (4), 1817-1824, 2017 | 36 | 2017 |
