Fitness and stability of obligate cross-feeding interactions that emerge upon gene loss in bacteria S Pande, H Merker, K Bohl, M Reichelt, S Schuster, LF De Figueiredo, ... The ISME journal 8 (5), 953-962, 2014 | 315 | 2014 |
Computing the shortest elementary flux modes in genome-scale metabolic networks LF De Figueiredo, A Podhorski, A Rubio, C Kaleta, JE Beasley, ... Bioinformatics 25 (23), 3158, 2009 | 233 | 2009 |
KNIME-CDK: Workflow-driven cheminformatics S Beisken, T Meinl, B Wiswedel, LF de Figueiredo, M Berthold, ... BMC bioinformatics 14, 1-4, 2013 | 174 | 2013 |
Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns C Kaleta, LF De Figueiredo, S Schuster Genome Research 19 (10), 1872-1883, 2009 | 136 | 2009 |
Metabolic reconstruction, constraint-based analysis and game theory to probe genome-scale metabolic networks E Ruppin, JA Papin, LF De Figueiredo, S Schuster Current opinion in biotechnology 21 (4), 502-510, 2010 | 108 | 2010 |
Can sugars be produced from fatty acids? A test case for pathway analysis tools LF De Figueiredo, S Schuster, C Kaleta, DA Fell Bioinformatics 24 (22), 2615-2621, 2008 | 104 | 2008 |
Pathway analysis of NAD+ metabolism F Luis, IG Toni, Z Mathias, S Stefan Biochemical Journal 439 (2), 341-348, 2011 | 76* | 2011 |
Exploring metabolic pathways in genome-scale networks via generating flux modes A Rezola, LF de Figueiredo, M Brock, J Pey, A Podhorski, C Wittmann, ... Bioinformatics 27 (4), 534, 2011 | 73 | 2011 |
NAD biosynthesis and salvage‐a phylogenetic perspective TI Gossmann, M Ziegler, P Puntervoll, LF de Figueiredo, S Schuster, ... FEBS Journal, 2012 | 63 | 2012 |
nmrML: a community supported open data standard for the description, storage, and exchange of NMR data D Schober, D Jacob, M Wilson, JA Cruz, A Marcu, JR Grant, A Moing, ... Analytical Chemistry 90 (1), 649-656, 2018 | 62 | 2018 |
In Silico Evidence for Gluconeogenesis from Fatty Acids in Humans C Kaleta, LF de Figueiredo, S Werner, R Guthke, M Ristow, S Schuster PLoS Computational Biology 7 (7), e1002116, 2011 | 61 | 2011 |
EFMEvolver: Computing elementary flux modes in genome-scale metabolic networks C Kaleta, LF Figueiredo, J Behre, S Schuster Gesellschaft für Informatik eV, 2009 | 61 | 2009 |
Combining metabolic pathway analysis with evolutionary game theory. Explaining the occurrence of low-yield pathways by an analytic optimization approach S Schuster, LF de Figueiredo, A Schroeter, C Kaleta Biosystems 105 (2), 147-153, 2011 | 52 | 2011 |
Selection of human tissue-specific elementary flux modes using gene expression data A Rezola, J Pey, LF de Figueiredo, A Podhorski, S Schuster, A Rubio, ... Bioinformatics 29 (16), 2009-2016, 2013 | 33 | 2013 |
Detecting and investigating substrate cycles in a genome‐scale human metabolic network J Gebauer, S Schuster, LF de Figueiredo, C Kaleta The FEBS journal 279 (17), 3192-3202, 2012 | 32 | 2012 |
CASOP GS: Computing intervention strategies targeted at production improvement in genome-scale metabolic networks K Bohl, LF Figueiredo, O Hädicke, S Klamt, C Kost, S Schuster, C Kaleta Gesellschaft für Informatik eV, 2010 | 24 | 2010 |
Genome‐scale metabolic representation of Amycolatopsis balhimycina W Vongsangnak, LF Figueiredo, J Förster, T Weber, J Thykaer, ... Biotechnology and bioengineering 109 (7), 1798-1807, 2012 | 23 | 2012 |
Detecting structural invariants in biological reaction networks J Behre, LF de Figueiredo, S Schuster, C Kaleta Bacterial Molecular Networks: Methods and Protocols, 377-407, 2012 | 14 | 2012 |
Response to comment on ‘Can sugars be produced from fatty acids? A test case for pathway analysis tools’ LF de Figueiredo, S Schuster, C Kaleta, DA Fell Bioinformatics 25 (24), 3330-3331, 2009 | 10 | 2009 |
Predicting novel pathways in genome-scale metabolic networks S Schuster, LF de Figueiredo, C Kaleta Biochemical Society Transactions 38 (part 5), 1202-1205, 2010 | 8 | 2010 |