| Orchestrating high-throughput genomic analysis with Bioconductor W Huber, VJ Carey, R Gentleman, S Anders, M Carlson, BS Carvalho, ... Nature methods 12 (2), 115-121, 2015 | 3523 | 2015 |
| Visualizing genomic data using Gviz and bioconductor F Hahne, R Ivanek Statistical genomics: methods and protocols, 335-351, 2016 | 784 | 2016 |
| flowCore: a Bioconductor package for high throughput flow cytometry F Hahne, N LeMeur, RR Brinkman, B Ellis, P Haaland, D Sarkar, ... BMC bioinformatics 10, 1-8, 2009 | 524 | 2009 |
| QuasR: quantification and annotation of short reads in R D Gaidatzis, A Lerch, F Hahne, MB Stadler Bioinformatics 31 (7), 1130-1132, 2015 | 303 | 2015 |
| Unsupervised machine learning F Hahne, W Huber, R Gentleman, S Falcon, R Gentleman, VJ Carey Bioconductor case studies, 137-157, 2008 | 218 | 2008 |
| flowCore: Basic structures for flow cytometry data B Ellis, P Haaland, F Hahne, N Le Meur, N Gopalakrishnan, J Spidlen, ... R package version 1 (0), 2019 | 197 | 2019 |
| flowClust: a Bioconductor package for automated gating of flow cytometry data K Lo, F Hahne, RR Brinkman, R Gottardo BMC bioinformatics 10, 1-8, 2009 | 193 | 2009 |
| Genefilter: methods for filtering genes from high-throughput experiments R Gentleman, V Carey, W Huber, F Hahne R package version 1 (1), 2015 | 178 | 2015 |
| Bioconductor case studies F Hahne, W Huber, R Gentleman, S Falcon Springer Science & Business Media, 2010 | 161 | 2010 |
| Per‐channel basis normalization methods for flow cytometry data F Hahne, AH Khodabakhshi, A Bashashati, CJ Wong, RD Gascoyne, ... Cytometry Part A: The Journal of the International Society for Advancement …, 2010 | 141 | 2010 |
| Hypergeometric testing used for gene set enrichment analysis F Hahne, W Huber, R Gentleman, S Falcon, S Falcon, R Gentleman Bioconductor case studies, 207-220, 2008 | 98* | 2008 |
| Genefilter: Methods for filtering genes from microarray experiments R Gentleman, V Carey, W Huber, F Hahne R package version 1 (0), 2011 | 87 | 2011 |
| Heart structure-specific transcriptomic atlas reveals conserved microRNA-mRNA interactions C Vacchi-Suzzi, F Hahne, P Scheubel, M Marcellin, V Dubost, M Westphal, ... PloS one 8 (1), e52442, 2013 | 85 | 2013 |
| Identification of Dlk1-Dio3 Imprinted Gene Cluster Noncoding RNAs as Novel Candidate Biomarkers for Liver Tumor Promotion H Lempiäinen, P Couttet, F Bolognani, A Mueller, V Dubost, R Luisier, ... Toxicological sciences 131 (2), 375-386, 2013 | 79 | 2013 |
| Rgraphviz: Provides plotting capabilities for R graph objects KD Hansen, J Gentry, L Long, R Gentleman, S Falcon, F Hahne, D Sarkar R package version 2 (0), 2019 | 70 | 2019 |
| Rgraphviz: Provides plotting capabilities for R graph objects J Gentry, L Long, R Gentleman, S Falcon, F Hahne, D Sarkar, K Hansen R package version 1 (0), 2010 | 66 | 2010 |
| Reduced expression of vacuole membrane protein 1 affects the invasion capacity of tumor cells M Sauermann, Ö Sahin, H Sültmann, F Hahne, S Blaszkiewicz, M Majety, ... Oncogene 27 (9), 1320-1326, 2008 | 65 | 2008 |
| The LIFEdb database in 2006 A Mehrle, H Rosenfelder, I Schupp, C del Val, D Arlt, F Hahne, S Bechtel, ... Nucleic acids research 34 (suppl_1), D415-D418, 2006 | 43 | 2006 |
| Functional profiling: from microarrays via cell-based assays to novel tumor relevant modulators of the cell cycle D Arlt, W Huber, U Liebel, C Schmidt, M Majety, M Sauermann, ... Cancer Research 65 (17), 7733-7742, 2005 | 37 | 2005 |
| Gviz: Plotting data and annotation information along genomic coordinates F Hahne, S Durinck, R Ivanek, A Mueller, S Lianoglou, G Tan, L Parsons, ... R package version 1 (4), 2013 | 35 | 2013 |
