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Alessandro M. Varani
Alessandro M. Varani
UNESP - Sao Paulo State University
在 unesp.br 的电子邮件经过验证 - 首页
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ISsaga is an ensemble of web-based methods for high throughput identification and semi-automatic annotation of insertion sequences in prokaryotic genomes
AM Varani, P Siguier, E Gourbeyre, V Charneau, M Chandler
Genome biology 12, 1-9, 2011
3342011
Insertion Sequence IS26 Reorganizes Plasmids in Clinically Isolated Multidrug-Resistant Bacteria by Replicative Transposition
S He, AB Hickman, AM Varani, P Siguier, M Chandler, JP Dekker, F Dyda
MBio 6 (3), 10.1128/mbio. 00762-15, 2015
2702015
Everyman's guide to bacterial insertion sequences
P Siguier, E Gourbeyre, A Varani, B Ton-Hoang, M Chandler
Mobile DNA Iii, 555-590, 2015
238*2015
Building the sugarcane genome for biotechnology and identifying evolutionary trends
N De Setta, CB Monteiro-Vitorello, CJ Metcalfe, GMQ Cruz, LE Del Bem, ...
BMC genomics 15, 1-18, 2014
1432014
A Metagenomic Approach to Cyanobacterial Genomics
DO Alvarenga, MF Fiore, AM Varani
Frontiers in Microbiology, 2017
1092017
The Family Bradyrhizobiaceae. U: The Prokaryotes: Alphaproteobacteria and Betaproteobacteria (Rosenberg E. I sur., Ur.)
JA Marcondes De Souza, LM Carareto Alves, A de Mello Varani, ...
Springer Verlag, Berlin, 2014
88*2014
The Family Rhizobiaceae
EGML Lucia Maria Carrareto Alves, Jackson Antônio Marcondes de Souza ...
The Prokaryotes: Alphaproteobacteria and Betaproteobacteria, 419-437, 2014
87*2014
Genomic signatures and co‐occurrence patterns of the ultra‐small Saccharimonadia (phylum CPR/Patescibacteria) suggest a symbiotic lifestyle
LN Lemos, JD Medeiros, F Dini‐Andreote, GR Fernandes, AM Varani, ...
Molecular ecology 28 (18), 4259-4271, 2019
852019
Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments
P Siguier, A Varani, J Perochon, M Chandler
Mobile Genetic Elements: Protocols and Genomic Applications, 91-103, 2012
782012
The Chloroplast Genome of Passiflora edulis (Passifloraceae) Assembled from Long Sequence Reads: Structural Organization and Phylogenomic Studies in …
LA Cauz-Santos, CF Munhoz, N Rodde, S Cauet, AA Santos, HA Penha, ...
Frontiers in Plant Science 8, 334, 2017
762017
The role of prophage in plant-pathogenic bacteria
AM Varani, CB Monteiro-Vitorello, HI Nakaya, MA Van Sluys
Annual review of phytopathology 51, 429-451, 2013
762013
The IS6 family, a clinically important group of insertion sequences including IS26
A Varani, S He, P Siguier, K Ross, M Chandler
Mobile Dna 12, 1-18, 2021
732021
TnCentral: a Prokaryotic Transposable Element Database and Web Portal for Transposon Analysis
CM Ross K, Varani AM, Snesrud E, Huang H, Alvarenga DO, Zhang J, Wu C, McGann P
mBio 12 (Number 5), e02060-21, 2021
73*2021
Laterally transferred genomic islands in Xanthomonadales related to pathogenicity and primary metabolism
WC Lima, ACM Paquola, AM Varani, MA Van Sluys, CFM Menck
FEMS microbiology letters 281 (1), 87-97, 2008
682008
Xylella and Xanthomonas Mobil'omics
CB Monteiro-Vitorello, MC De Oliveira, MM Zerillo, AM Varani, E Civerolo, ...
Omics: a journal of integrative biology 9 (2), 146-159, 2005
662005
Origins of the Xylella fastidiosa Prophage-Like Regions and Their Impact in Genome Differentiation
A de Mello Varani, RC Souza, HI Nakaya, WC de Lima, ...
PLoS One 3 (12), e4059, 2008
642008
Phylogenetic and antimicrobial resistance gene analysis of Salmonella Typhimurium strains isolated in Brazil by whole genome sequencing
JPF Fernanda Almeida , Amanda Aparecida Seribelli, Marta Inês Cazentini ...
PLoS ONE 13 ((8)e0201882), 16, 2018
63*2018
NAD biosynthesis evolution in bacteria: lateral gene transfer of kynurenine pathway in Xanthomonadales and Flavobacteriales
WC Lima, AM Varani, CFM Menck
Molecular biology and evolution 26 (2), 399-406, 2009
612009
Mechanisms of evolution in high-consequence drug resistance plasmids
S He, M Chandler, AM Varani, AB Hickman, JP Dekker, F Dyda
MBio 7 (6), 10.1128/mbio. 01987-16, 2016
592016
The Chloroplast Genome of Utricularia reniformis Sheds Light on the Evolution of the ndh Gene Complex of Terrestrial Carnivorous Plants from the …
SR Silva, YCA Diaz, HA Penha, DG Pinheiro, CC Fernandes, ...
PLoS One 11 (10), e0165176, 2016
572016
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