| Cytoplasmic short linear motifs in ACE2 and integrin β3 link SARS-CoV-2 host cell receptors to mediators of endocytosis and autophagy J Kliche, H Kuss, M Ali, Y Ivarsson Science signaling 14 (665), eabf1117, 2021 | 69 | 2021 |
| Large scale discovery of coronavirus-host factor protein interaction motifs reveals SARS-CoV-2 specific mechanisms and vulnerabilities T Kruse, C Benz, DH Garvanska, R Lindqvist, F Mihalic, F Coscia, R Inturi, ... Nature Communications 12 (1), 6761, 2021 | 58 | 2021 |
| Proteome‐wide analysis of phospho‐regulated PDZ domain interactions GN Sundell, R Arnold, M Ali, P Naksukpaiboon, J Orts, P Güntert, CN Chi, ... Molecular systems biology 14 (8), e8129, 2018 | 56 | 2018 |
| Proteome‐scale mapping of binding sites in the unstructured regions of the human proteome C Benz, M Ali, I Krystkowiak, L Simonetti, A Sayadi, F Mihalic, J Kliche, ... Molecular Systems Biology 18 (1), e10584, 2022 | 53 | 2022 |
| Screening intrinsically disordered regions for short linear binding motifs M Ali, L Simonetti, Y Ivarsson Intrinsically Disordered Proteins: Methods and Protocols, 529-552, 2020 | 25 | 2020 |
| Integrated analysis of Shank1 PDZ interactions with C-terminal and internal binding motifs M Ali, MM McAuley, S Lüchow, S Knapp, AC Joerger, Y Ivarsson Current Research in Structural Biology 3, 41-50, 2021 | 8 | 2021 |
| Proteome-scale amino-acid resolution footprinting of protein-binding sites in the intrinsically disordered regions of the human proteome C Benz, M Ali, I Krystkowiak, L Simonetti, A Sayadi, F Mihalic, J Kliche, ... BioRxiv, 2021.04. 13.439572, 2021 | 5 | 2021 |
| High‐throughput discovery of functional disordered regions M Ali, Y Ivarsson Molecular systems biology 14 (5), e8377, 2018 | 4 | 2018 |
| Elucidation of Short Linear Motif-Based Interactions of the FERM Domains of Ezrin, Radixin, Moesin, and Merlin M Ali, A Khramushin, VK Yadav, O Schueler-Furman, Y Ivarsson Biochemistry, 2023 | 3 | 2023 |
| Defining binding motifs and dynamics of the multi-pocket FERM domain from ezrin, radixin, moesin and merlin M Ali, A Khramushin, VK Yadav, O Schueler-Furman, Y Ivarsson bioRxiv, 2020.11. 23.394106, 2020 | 3 | 2020 |
| Cytoplasmic short linear motifs in ACE2 and integrin β3 link SARS-CoV-2 host cell receptors to endocytosis and autophagy J Kliche, M Ali, Y Ivarsson bioRxiv, 2020.10. 06.327742, 2020 | | 2020 |
| Identification of SLiMs: Mapping and characterizing motif-based protein interactions M Ali Acta Universitatis Upsaliensis, 2020 | | 2020 |
