Polyploidy, the nucleotype, and novelty: the impact of genome doubling on the biology of the cell JJ Doyle, JE Coate International Journal of Plant Sciences 180 (1), 1-52, 2019 | 261 | 2019 |
Ploidy and size at multiple scales in the Arabidopsis sepal DO Robinson, JE Coate, A Singh, L Hong, M Bush, JJ Doyle, AHK Roeder The Plant Cell 30 (10), 2308-2329, 2018 | 154 | 2018 |
The legacy of diploid progenitors in allopolyploid gene expression patterns RJA Buggs, JF Wendel, JJ Doyle, DE Soltis, PS Soltis, JE Coate Philosophical Transactions of the Royal Society B: Biological Sciences 369 …, 2014 | 117 | 2014 |
Quantifying whole transcriptome size, a prerequisite for understanding transcriptome evolution across species: an example from a plant allopolyploid JE Coate, JJ Doyle Genome biology and evolution 2, 534-546, 2010 | 111 | 2010 |
A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA‐seq in plant species DC Ilut, JE Coate, AK Luciano, TG Owens, GD May, A Farmer, JJ Doyle American journal of botany 99 (2), 383-396, 2012 | 100 | 2012 |
Lessons from natural and artificial polyploids in higher plants M Hegarty, J Coate, S Sherman-Broyles, R Abbott, S Hiscock, J Doyle Cytogenetic and genome research 140 (2-4), 204-225, 2013 | 89 | 2013 |
Anatomical, biochemical, and photosynthetic responses to recent allopolyploidy in Glycine dolichocarpa (Fabaceae) JE Coate, AK Luciano, V Seralathan, KJ Minchew, TG Owens, JJ Doyle American Journal of Botany 99 (1), 55-67, 2012 | 80 | 2012 |
Variation in transcriptome size: are we getting the message? JE Coate, JJ Doyle Chromosoma 124, 27-43, 2015 | 73 | 2015 |
Transgressive physiological and transcriptomic responses to light stress in allopolyploid Glycine dolichocarpa (Leguminosae) JE Coate, AF Powell, TG Owens, JJ Doyle Heredity 110 (2), 160-170, 2013 | 63 | 2013 |
Gene Balance Predicts Transcriptional Responses Immediately Following Ploidy Change in Arabidopsis thaliana MJ Song, BI Potter, JJ Doyle, JE Coate The Plant Cell 32 (5), 1434-1448, 2020 | 62 | 2020 |
Comparative evolution of photosynthetic genes in response to polyploid and nonpolyploid duplication JE Coate, JA Schlueter, AM Whaley, JJ Doyle Plant Physiology 155 (4), 2081-2095, 2011 | 61 | 2011 |
The wild side of a major crop: soybean's perennial cousins from Down Under S Sherman‐Broyles, A Bombarely, AF Powell, JL Doyle, AN Egan, ... American journal of botany 101 (10), 1651-1665, 2014 | 58 | 2014 |
Extensive translational regulation of gene expression in an allopolyploid (Glycine dolichocarpa) JE Coate, H Bar, JJ Doyle Plant Cell, 2014 | 58 | 2014 |
Fifteen compelling open questions in plant cell biology AHK Roeder, MS Otegui, R Dixit, CT Anderson, C Faulkner, Y Zhang, ... The Plant Cell 34 (1), 72-102, 2022 | 41 | 2022 |
Expression‐level support for gene dosage sensitivity in three Glycine subgenus Glycine polyploids and their diploid progenitors JE Coate, MJ Song, A Bombarely, JJ Doyle New Phytologist 212 (4), 1083-1093, 2016 | 30 | 2016 |
Mining transcriptomic data to study the origins and evolution of a plant allopolyploid complex A Bombarely, JE Coate, JJ Doyle PeerJ 2, e391, 2014 | 29 | 2014 |
Expression partitioning of duplicate genes at single cell resolution in Arabidopsis roots JE Coate, AD Farmer, JW Schiefelbein, JJ Doyle Frontiers in Genetics 11, 596150, 2020 | 24 | 2020 |
Autopolyploidy: an epigenetic macromutation JJ Doyle, JE Coate American Journal of Botany 107 (8), 1097-1100, 2020 | 20 | 2020 |
Divergent evolutionary fates of major photosynthetic gene networks following gene and whole genome duplications JE Coate, JJ Doyle Plant signaling & behavior 6 (4), 594-597, 2011 | 20 | 2011 |
Genomics and transcriptomics of photosynthesis in polyploids JE Coate, JJ Doyle Polyploid and hybrid genomics, 153-169, 2013 | 18 | 2013 |