A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis MA Dillies, A Rau, J Aubert, C Hennequet-Antier, M Jeanmougin, ... Briefings in bioinformatics 14 (6), 671-683, 2013 | 1693 | 2013 |
Fast computation and applications of genome mappability T Derrien, J Estellé, S Marco Sola, DG Knowles, E Raineri, R Guigó, ... PloS one 7 (1), e30377, 2012 | 579 | 2012 |
A reference gene catalogue of the pig gut microbiome L Xiao, J Estellé, P Kiilerich, Y Ramayo-Caldas, Z Xia, Q Feng, S Liang, ... Nature microbiology 1 (12), 1-6, 2016 | 448 | 2016 |
Early‐life establishment of the swine gut microbiome and impact on host phenotypes N Mach, M Berri, J Estellé, F Levenez, G Lemonnier, C Denis, JJ Leplat, ... Environmental microbiology reports 7 (3), 554-569, 2015 | 419 | 2015 |
Phylogenetic network analysis applied to pig gut microbiota identifies an ecosystem structure linked with growth traits Y Ramayo-Caldas, N Mach, P Lepage, F Levenez, C Denis, G Lemonnier, ... The ISME journal 10 (12), 2973-2977, 2016 | 319 | 2016 |
Characterization of bacterial microbiota compositions along the intestinal tract in pigs and their interactions and functions D Crespo-Piazuelo, J Estellé, M Revilla, L Criado-Mesas, ... Scientific reports 8 (1), 12727, 2018 | 241 | 2018 |
Tuning of natural killer cell reactivity by NKp46 and Helios calibrates T cell responses E Narni-Mancinelli, BN Jaeger, C Bernat, A Fenis, S Kung, A De Gassart, ... Science 335 (6066), 344-348, 2012 | 236 | 2012 |
Chronic Trichuris muris infection decreases diversity of the intestinal microbiota and concomitantly increases the abundance of lactobacilli JB Holm, D Sorobetea, P Kiilerich, Y Ramayo-Caldas, J Estellé, T Ma, ... PloS one 10 (5), e0125495, 2015 | 206 | 2015 |
Liver transcriptome profile in pigs with extreme phenotypes of intramuscular fatty acid composition Y Ramayo-Caldas, N Mach, A Esteve-Codina, J Corominas, A Castelló, ... BMC genomics 13, 1-18, 2012 | 166 | 2012 |
Genomic diversity, linkage disequilibrium and selection signatures in European local pig breeds assessed with a high density SNP chip M Munoz, R Bozzi, J Garcia-Casco, Y Nunez, A Ribani, O Franci, F Garcia, ... Scientific reports 9 (1), 13546, 2019 | 119 | 2019 |
Analysis of porcine adipose tissue transcriptome reveals differences in de novo fatty acid synthesis in pigs with divergent muscle fatty acid composition J Corominas, Y Ramayo-Caldas, A Puig-Oliveras, J Estellé, A Castelló, ... BMC genomics 14, 1-14, 2013 | 118 | 2013 |
Association with litter size of new polymorphisms on ESR1 and ESR2 genes in a Chinese-European pig line G Muñoz, C Ovilo, J Estellé, L Silió, A Fernández, C Rodriguez Genetics Selection Evolution 39, 1-12, 2007 | 102 | 2007 |
Diversity across major and candidate genes in European local pig breeds M Muñoz, R Bozzi, F García, Y Núñez, C Geraci, A Crovetti, ... PloS one 13 (11), e0207475, 2018 | 86 | 2018 |
Identification of rumen microbial biomarkers linked to methane emission in Holstein dairy cows Y Ramayo‐Caldas, L Zingaretti, M Popova, J Estellé, A Bernard, N Pons, ... Journal of Animal Breeding and Genetics 137 (1), 49-59, 2020 | 85 | 2020 |
Differences in muscle transcriptome among pigs phenotypically extreme for fatty acid composition A Puig-Oliveras, Y Ramayo-Caldas, J Corominas, J Estellé, ... PloS one 9 (6), e99720, 2014 | 84 | 2014 |
Early Salmonella Typhimurium infection in pigs disrupts Microbiome composition and functionality principally at the ileum mucosa H Argüello, J Estellé, S Zaldívar-López, Á Jiménez-Marín, A Carvajal, ... Scientific reports 8 (1), 7788, 2018 | 83 | 2018 |
Association between the pig genome and its gut microbiota composition D Crespo-Piazuelo, L Migura-Garcia, J Estellé, L Criado-Mesas, M Revilla, ... Scientific reports 9 (1), 8791, 2019 | 76 | 2019 |
The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild J Prado-Martinez, I Hernando-Herraez, B Lorente-Galdos, M Dabad, ... BMC genomics 14, 1-8, 2013 | 71 | 2013 |
Effect of the porcine IGF2-intron3-G3072A substitution in an outbred Large White population and in an Iberian × Landrace cross J Estellé, A Mercadé, JL Noguera, M Pérez-Enciso, C Ovilo, A Sanchez, ... Journal of animal science 83 (12), 2723-2728, 2005 | 69 | 2005 |
QTL detection on porcine chromosome 12 for fatty‐acid composition and association analyses of the fatty acid synthase, gastric inhibitory polypeptide and acetyl‐coenzyme a … G Muñoz, E Alves, A Fernández, C Ovilo, C Barragán, J Estellé, ... Animal genetics 38 (6), 639-646, 2007 | 63 | 2007 |