Communication avoiding and overlapping for numerical linear algebra E Georganas, J González-Domínguez, E Solomonik, Y Zheng, J Tourino, ... SC'12: Proceedings of the International Conference on High Performance …, 2012 | 56 | 2012 |
Multithreaded and Spark parallelization of feature selection filters C Eiras-Franco, V Bolón-Canedo, S Ramos, J González-Domínguez, ... Journal of Computational Science 17, 609-619, 2016 | 49 | 2016 |
ParDRe: faster parallel duplicated reads removal tool for sequencing studies J González-Domínguez, B Schmidt Bioinformatics 32 (10), 1562-1564, 2016 | 48 | 2016 |
GPU-accelerated exhaustive search for third-order epistatic interactions in case–control studies J González-Domínguez, B Schmidt Journal of Computational Science 8, 93-100, 2015 | 40 | 2015 |
Parallel Programming: Concepts and Practice B Schmidt, J Gonzalez-Dominguez, C Hundt, M Schlarb Morgan Kaufmann, 2017 | 39 | 2017 |
Servet: A benchmark suite for autotuning on multicore clusters J González-Domínguez, GL Taboada, BB Fragüela, MJ Martín, J Tourino 2010 IEEE International Symposium on Parallel & Distributed Processing …, 2010 | 38 | 2010 |
FPGA-based acceleration of detecting statistical epistasis in GWAS L Wienbrandt, JC Kässens, J González-Domínguez, B Schmidt, ... Procedia Computer Science 29, 220-230, 2014 | 35 | 2014 |
Parallelizing epistasis detection in GWAS on FPGA and GPU-accelerated computing systems J González-Domínguez, L Wienbrandt, JC Kässens, D Ellinghaus, ... IEEE/ACM transactions on computational biology and bioinformatics 12 (5 …, 2015 | 34 | 2015 |
MSAProbs-MPI: parallel multiple sequence aligner for distributed-memory systems J González-Domínguez, Y Liu, J Touriño, B Schmidt Bioinformatics 32 (24), 3826-3828, 2016 | 33 | 2016 |
High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs JC Kässens, L Wienbrandt, J González-Domínguez, B Schmidt, ... Journal of Computational Science 9, 131-136, 2015 | 32 | 2015 |
Analysis of I/O performance on an Amazon EC2 cluster compute and high I/O platform RR Expósito, GL Taboada, S Ramos, J González-Domínguez, J Touriño, ... Journal of grid computing 11, 613-631, 2013 | 28 | 2013 |
Parallel pairwise epistasis detection on heterogeneous computing architectures J González-Domínguez, S Ramos, J Touriño, B Schmidt IEEE Transactions on Parallel and Distributed Systems 27 (8), 2329-2340, 2015 | 25 | 2015 |
Fast search of third-order epistatic interactions on CPU and GPU clusters C Ponte-Fernández, J González-Domínguez, MJ Martín The International Journal of High Performance Computing Applications 34 (1 …, 2020 | 24 | 2020 |
UPC++ for bioinformatics: A case study using genome-wide association studies JC Kässens, J González-Domínguez, L Wienbrandt, B Schmidt 2014 IEEE International Conference on Cluster Computing (CLUSTER), 248-256, 2014 | 24 | 2014 |
Automatic mapping of parallel applications on multicore architectures using the Servet benchmark suite J González-Domínguez, GL Taboada, BB Fraguela, MJ Martín, J Tourino Computers & Electrical Engineering 38 (2), 258-269, 2012 | 24 | 2012 |
Hybrid CPU/GPU acceleration of detection of 2-SNP epistatic interactions in GWAS J González-Domínguez, B Schmidt, JC Kässens, L Wienbrandt Euro-Par 2014 Parallel Processing: 20th International Conference, Porto …, 2014 | 21 | 2014 |
Parallel feature selection for distributed-memory clusters J González-Domínguez, V Bolón-Canedo, B Freire, J Touriño Information Sciences 496, 399-409, 2019 | 20 | 2019 |
Parallel and scalable short-read alignment on multi-core clusters using UPC++ J Gonzalez-Dominguez, Y Liu, B Schmidt PloS one 11 (1), e0145490, 2016 | 20 | 2016 |
MarDRe: efficient MapReduce-based removal of duplicate DNA reads in the cloud RR Expósito, J Veiga, J González-Domínguez, J Touriño Bioinformatics 33 (17), 2762-2764, 2017 | 19 | 2017 |
Accelerating binary biclustering on platforms with CUDA-enabled GPUs J González-Domínguez, RR Expósito Information Sciences 496, 317-325, 2019 | 16 | 2019 |