| Single-cell-based analysis highlights a surge in cell-to-cell molecular variability preceding irreversible commitment in a differentiation process A Richard, L Boullu, U Herbach, A Bonnafoux, V Morin, E Vallin, ... PLoS biology 14 (12), e1002585, 2016 | 212 | 2016 |
| SINCERITIES: inferring gene regulatory networks from time-stamped single cell transcriptional expression profiles N Papili Gao, SMM Ud-Dean, O Gandrillon, R Gunawan Bioinformatics 34 (2), 258-266, 2018 | 200 | 2018 |
| Glycosylation flux analysis of immunoglobulin G in chinese hamster ovary perfusion cell culture S Hutter, M Wolf, N Papili Gao, D Lepori, T Schweigler, M Morbidelli, ... Processes 6 (10), 176, 2018 | 21 | 2018 |
| CALISTA: clustering and LINEAGE inference in single-cell transcriptional analysis N Papili Gao, T Hartmann, T Fang, R Gunawan Frontiers in bioengineering and biotechnology 8, 18, 2020 | 19 | 2020 |
| Universality of cell differentiation trajectories revealed by a reconstruction of transcriptional uncertainty landscapes from single-cell transcriptomic data NP Gao, O Gandrillon, A Páldi, U Herbach, R Gunawan bioRxiv, 2020.04. 23.056069, 2020 | 17 | 2020 |
| Global genome decompaction leads to stochastic activation of gene expression as a first step toward fate commitment in human hematopoietic cells R Parmentier, L Racine, A Moussy, S Chantalat, R Sudharshan, ... PLoS Biology 20 (10), e3001849, 2022 | 14 | 2022 |
| Constraints on human CD34+ cell fate due to lentiviral vectors can be relieved by valproic acid A Moussy, N Papili Gao, G Corre, V Poletti, S Majdoul, D Fenard, ... Human gene therapy 30 (8), 1023-1034, 2019 | 8 | 2019 |
| Single-cell transcriptional uncertainty landscape of cell differentiation NP Gao, O Gandrillon, A Páldi, U Herbach, R Gunawan F1000Research 12, 2023 | 6 | 2023 |
| Gene regulatory network inference using time-stamped cross-sectional single cell expression data NP Gao, SMM Ud-Dean, R Gunawan IFAC-PapersOnLine 49 (26), 147-152, 2016 | 4 | 2016 |
| Immobilized NRG1 Accelerates Neural Crest like Cell Differentiation Toward Functional Schwann Cells Through Sustained Erk1/2 Activation and YAP/TAZ Nuclear Translocation G Tseropoulos, P Mehrotra, AK Podder, E Wilson, Y Zhang, J Wang, ... Advanced Science, 2402607, 2024 | | 2024 |
| Single-cell transcriptional uncertainty landscape of cel l differentiation [version 2; peer review: 2 approved] NP Gao, O Gandrillon, A Páldi, U Herbach, R Gunawan | | 2023 |
| Quasi-stationary behavior for a piecewise deterministic Markov model of chemostat: the Crump–Young model B Cloez, C Fritsch Annales Henri Lebesgue 6, 1371-1427, 2023 | | 2023 |
| Global genome decompaction leads to stochastic activation of gene expression as a first step toward fate commitment in human hematopoietic stem cells P Romuald, M Alice, C Sophie, R Laëtitia, S Ravi, PG Nan, S Daniel, ... | | 2020 |
| Reconstruction of Waddington's Epigenetic Landscape from Single-Cell Transcriptomics of Stem Cell Differentiation NP Gao, R Gunawan 2019 AIChE Annual Meeting, 2019 | | 2019 |
| Analysis of single-cell transcriptional profiles N Papili Gao ETH Zurich, 2019 | | 2019 |
| Imputation of Single-Cell Expression Data NP Gao, R Gunawan 2018 AIChE Annual Meeting, 2018 | | 2018 |
| A Two-State Model-Based Cell Clustering and Network Inference for Single-Cell Gene Expression Data NP Gao, T Hartmann, R Gunawan 2017 AIChE Annual Meeting, 2017 | | 2017 |
| Inferring Gene Regulatory Networks from Single Cell Expression Data N Papili Gao, R Gunawan AICHE, 2016 | | 2016 |
| SINCERITIES: Inferring Gene Regulatory Network From NP Gao, SMM Ud-Dean, R Gunawan | | |
| Phage therapy: A software system for phage quantification and kinetic model inference. N Papili Gao | | |
