Deep and accurate detection of m6A RNA modifications using miCLIP2 and m6Aboost machine learning N Körtel, C Rücklé, Y Zhou, A Busch, P Hoch-Kraft, FXR Sutandy, J Haase, ... Nucleic acids research 49 (16), e92-e92, 2021 | 64 | 2021 |
Concepts and methods for transcriptome-wide prediction of chemical messenger RNA modifications with machine learning P Acera Mateos, Y Zhou, K Zarnack, E Eyras Briefings in Bioinformatics 24 (3), bbad163, 2023 | 8 | 2023 |
RNA stability controlled by m6A methylation contributes to X-to-autosome dosage compensation in mammals C Rücklé, N Körtel, MF Basilicata, A Busch, Y Zhou, P Hoch-Kraft, ... Nature Structural & Molecular Biology 30 (8), 1207-1215, 2023 | 6 | 2023 |
Functional RNA dynamics are progressively governed by RNA destabilization during the adaptation to chronic hypoxia R Bauer, SP Meyer, KA Kloss, VM Guerrero Ruiz, S Reuscher, Y Zhou, ... International journal of molecular sciences 23 (10), 5824, 2022 | 5 | 2022 |
Prediction of m6A and m5C at single-molecule resolution reveals a transcriptome-wide co-occurrence of RNA modifications P Acera Mateos, A J Sethi, A Ravindran, A Srivastava, K Woodward, ... Nature Communications 15 (1), 3899, 2024 | 4 | 2024 |
m6Aboost You Zhou, Kathi Zarnack Bioconductor, 2021 | | 2021 |
cliProfiler: A package for the CLIP data visualization. You Zhou, Kathi Zarnack Bioconductor, 2021 | | 2021 |