| Organization of supercoil domains and their reorganization by transcription S Deng, RA Stein, NP Higgins Molecular microbiology 57 (6), 1511-1521, 2005 | 174 | 2005 |
| Direct Involvement of Type II Secretion System in Extracellular Translocation of Shewanella oneidensis Outer Membrane Cytochromes MtrC and OmcA L Shi, S Deng, MJ Marshall, Z Wang, DW Kennedy, AC Dohnalkova, ... Journal of bacteriology 190 (15), 5512-5516, 2008 | 161 | 2008 |
| Transcription-induced barriers to supercoil diffusion in the Salmonella typhimurium chromosome S Deng, RA Stein, NP Higgins Proceedings of the National Academy of Sciences 101 (10), 3398-3403, 2004 | 105 | 2004 |
| Increased production of fatty acids and triglycerides in Aspergillus oryzae by enhancing expressions of fatty acid synthesis-related genes K Tamano, KS Bruno, SA Karagiosis, DE Culley, S Deng, JR Collett, ... Applied microbiology and biotechnology 97, 269-281, 2013 | 81 | 2013 |
| Measuring chromosome dynamics on different time scales using resolvases with varying half‐lives RA Stein, S Deng, NP Higgins Molecular microbiology 56 (4), 1049-1061, 2005 | 80 | 2005 |
| DNA topology of highly transcribed operons in Salmonella enterica serovar Typhimurium BM Booker, S Deng, NP Higgins Molecular microbiology 78 (6), 1348-1364, 2010 | 62 | 2010 |
| Renewable diesel via hydrothermal liquefaction of oleaginous yeast and residual lignin from bioconversion of corn stover JR Collett, JM Billing, PA Meyer, AJ Schmidt, AB Remington, ER Hawley, ... Applied Energy 233, 840-853, 2019 | 53 | 2019 |
| Superpoint-guided semi-supervised semantic segmentation of 3d point clouds S Deng, Q Dong, B Liu, Z Hu 2022 International conference on robotics and automation (ICRA), 9214-9220, 2022 | 31 | 2022 |
| Agrobacterium tumefaciens-mediated transformation of oleaginous yeast Lipomyces species Z Dai, S Deng, DE Culley, KS Bruno, JK Magnuson Applied Microbiology and Biotechnology 101, 6099-6110, 2017 | 28 | 2017 |
| Bacteriophage Mu targets the trinucleotide sequence CGG D Manna, S Deng, AM Breier, NP Higgins Journal of bacteriology 187 (10), 3586-3588, 2005 | 25 | 2005 |
| Transcriptomic analysis of the oleaginous yeast Lipomyces starkeyi during lipid accumulation on enzymatically treated corn stover hydrolysate KR Pomraning, JR Collett, J Kim, EA Panisko, DE Culley, Z Dai, S Deng, ... Biotechnology for Biofuels 12, 1-15, 2019 | 24 | 2019 |
| Domain behavior and supercoil dynamics in bacterial chromosomes NP Higgins, S Deng, Z Pang, RA Stein, K Champion, D Manna The bacterial chromosome, 133-153, 2004 | 22 | 2004 |
| PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements A Bilbao, N Munoz, J Kim, DJ Orton, Y Gao, K Poorey, KR Pomraning, ... Nature communications 14 (1), 2461, 2023 | 17 | 2023 |
| Integration of Proteomics and Metabolomics Into the Design, Build, Test, Learn Cycle to Improve 3-Hydroxypropionic Acid Production in Aspergillus pseudoterreus KR Pomraning, Z Dai, N Munoz, YM Kim, Y Gao, S Deng, J Kim, ... Frontiers in Bioengineering and Biotechnology 9, 603832, 2021 | 16 | 2021 |
| Structural analysis of N-and O-glycans using ZIC-HILIC/dialysis coupled to NMR detection Y Qu, J Feng, S Deng, L Cao, Q Zhang, R Zhao, Z Zhang, Y Jiang, ... Fungal Genetics and Biology 72, 207-215, 2014 | 16 | 2014 |
| Deletion analysis of the itaconic acid biosynthesis gene cluster components in Aspergillus pseudoterreus ATCC32359 S Deng, Z Dai, M Swita, KR Pomraning, B Hofstad, E Panisko, S Baker, ... Applied microbiology and biotechnology 104, 3981-3992, 2020 | 13 | 2020 |
| Deletion of the KU70 homologue facilitates gene targeting in Lipomyces starkeyi strain NRRL Y-11558 Z Dai, KR Pomraning, S Deng, BA Hofstad, EA Panisko, D Rodriguez, ... Current genetics 65, 269-282, 2019 | 13 | 2019 |
| Engineering Rhodosporidium toruloides for production of 3-hydroxypropionic acid from lignocellulosic hydrolysate D Liu, HJ Hwang, PB Otoupal, GM Geiselman, J Kim, KR Pomraning, ... Metabolic Engineering 78, 72-83, 2023 | 11 | 2023 |
| Itaconic acid production is regulated by LaeA in Aspergillus pseudoterreus KR Pomraning, Z Dai, N Munoz, YM Kim, Y Gao, S Deng, T Lemmon, ... Metabolic Engineering Communications 15, e00203, 2022 | 9 | 2022 |
| Language-Level Semantics-Conditioned 3D Point Cloud Segmentation B Liu, H Zeng, Q Dong, Z Hu Remote Sensing 16 (13), 2376, 2024 | 8 | 2024 |
