Genome sequence-based species delimitation with confidence intervals and improved distance functions JP Meier-Kolthoff, AF Auch, HP Klenk, M Göker BMC bioinformatics 14, 1-14, 2013 | 5604 | 2013 |
The complete genome sequence of the gastric pathogen Helicobacter pylori JF Tomb, O White, AR Kerlavage, RA Clayton, GG Sutton, ... Nature 388 (6642), 539-547, 1997 | 4390 | 1997 |
Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii CJ Bult, O White, GJ Olsen, L Zhou, RD Fleischmann, GG Sutton, ... Science 273 (5278), 1058-1073, 1996 | 3319 | 1996 |
Taxonomy, physiology, and natural products of Actinobacteria EA Barka, P Vatsa, L Sanchez, N Gaveau-Vaillant, C Jacquard, HP Klenk, ... Microbiology and molecular biology reviews 80 (1), 1-43, 2016 | 2129 | 2016 |
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus HP Klenk, RA Clayton, JF Tomb, O White, KE Nelson, KA Ketchum, ... Nature 390, 364-370, 1997 | 1730 | 1997 |
Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison AF Auch, M Von Jan, HP Klenk, M Göker Standards in Genomic Sciences 2 (1), 117-134, 2010 | 1531 | 2010 |
Novel genes for nitrite reductase and Amo‐related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling AH Treusch, S Leininger, A Kletzin, SC Schuster, HP Klenk, C Schleper Environmental microbiology 7 (12), 1985-1995, 2005 | 1092 | 2005 |
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea D Wu, P Hugenholtz, K Mavromatis, R Pukall, E Dalin, NN Ivanova, ... Nature 462 (7276), 1056-1060, 2009 | 1084 | 2009 |
Critical assessment of metagenome interpretation—a benchmark of metagenomics software A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ... Nature methods 14 (11), 1063-1071, 2017 | 753 | 2017 |
Genome-Based Taxonomic Classification of the Phylum Actinobacteria I Nouioui, L Carro, M García-López, JP Meier-Kolthoff, T Woyke, ... Frontiers in microbiology 9, 2007, 2018 | 605 | 2018 |
Taxonomic use of DNA G+ C content and DNA–DNA hybridization in the genomic age JP Meier-Kolthoff, HP Klenk, M Göker International journal of systematic and evolutionary microbiology 64 (Pt_2 …, 2014 | 589 | 2014 |
Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs AF Auch, HP Klenk, M Göker Standards in genomic sciences 2, 142-148, 2010 | 583 | 2010 |
The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea U Deppenmeier, A Johann, T Hartsch, R Merkl, RA Schmitz, ... J. Mol. Microbiol. Biotechnol 4 (4), 453-461, 2002 | 561 | 2002 |
Overview: a phylogenetic backbone and taxonomic framework for procaryotic systematics W Ludwig, HP Klenk Bergey’s Manual® of Systematic Bacteriology, 49-66, 2005 | 531 | 2005 |
When should a DDH experiment be mandatory in microbial taxonomy? JP Meier-Kolthoff, M Göker, C Spröer, HP Klenk Archives of Microbiology 195, 413-418, 2013 | 525 | 2013 |
Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy JP Meier-Kolthoff, RL Hahnke, J Petersen, C Scheuner, V Michael, ... Standards in genomic sciences 9, 1-19, 2014 | 488 | 2014 |
The genome sequence of the extreme thermophile Thermus thermophilus A Henne, H Brüggemann, C Raasch, A Wiezer, T Hartsch, H Liesegang, ... Nature Biotechnology 22 (5), 547-553, 2004 | 477 | 2004 |
Bacillus amyloliquefaciens, Bacillus velezensis, and Bacillus siamensis Form an “Operational Group B. amyloliquefaciens” within the B. subtilis Species Complex B Fan, J Blom, HP Klenk, R Borriss Frontiers in microbiology 8, 22, 2017 | 411 | 2017 |
Picrophilus gen. nov., fam. nov.: a novel aerobic, heterotrophic, thermoacidophilic genus and family comprising archaea capable of growth around pH 0. C Schleper, G Puehler, I Holz, A Gambacorta, D Janekovic, U Santarius, ... Journal of Bacteriology 177 (24), 7050-7059, 1995 | 379 | 1995 |
The genome of Sulfolobus acidocaldarius, a model organism of the Crenarchaeota L Chen, K Brügger, M Skovgaard, P Redder, Q She, E Torarinsson, ... Journal of Bacteriology 187 (14), 4992-4999, 2005 | 349 | 2005 |