| Amber 10 DA Case, TA Darden, TE Cheatham, CL Simmerling, J Wang, RE Duke, ... University of California, 2008 | 8597 | 2008 |
| Scalable algorithms for molecular dynamics simulations on commodity clusters KJ Bowers, E Chow, H Xu, RO Dror, MP Eastwood, BA Gregersen, ... Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, 84-es, 2006 | 3214 | 2006 |
| Anton, a special-purpose machine for molecular dynamics simulation DE Shaw, MM Deneroff, RO Dror, JS Kuskin, RH Larson, JK Salmon, ... Communications of the ACM 51 (7), 91-97, 2008 | 979 | 2008 |
| AMBER11. University of California, San Francisco DA Case, TA Darden, TE Cheatham III, CL Simmerling, J Wang, RE Duke, ... Google Scholar There is no corresponding record for this reference, 2010 | 561* | 2010 |
| Low mode search. An efficient, automated computational method for conformational analysis: application to cyclic and acyclic alkanes and cyclic peptides I Kolossváry, WC Guida Journal of the American Chemical Society 118 (21), 5011-5019, 1996 | 518 | 1996 |
| AMBER 10; University of California: San Francisco, 2008 DA Case, TA Darden, TE Cheatham III, CL Simmerling, J Wang, RE Duke, ... Google Scholar There is no corresponding record for this reference, 2008 | 508 | 2008 |
| Anton, a special-purpose machine for molecular dynamics simulation DE Shaw, MM Deneroff, RO Dror, JS Kuskin, RH Larson, JK Salmon, ... ACM SIGARCH Computer Architecture News 35 (2), 1-12, 2007 | 365 | 2007 |
| Superspreading driven by Marangoni flow AD Nikolov, DT Wasan, A Chengara, K Koczo, GA Policello, I Kolossvary Advances in colloid and interface science 96 (1-3), 325-338, 2002 | 254 | 2002 |
| The FF14SB force field DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ... Amber 14, 29-31, 2014 | 252 | 2014 |
| Low‐mode conformational search elucidated: Application to C39H80 and flexible docking of 9‐deazaguanine inhibitors into PNP I Kolossváry, WC Guida Journal of Computational Chemistry 20 (15), 1671-1684, 1999 | 232 | 1999 |
| Mechanism of Na+/H+ antiporting IT Arkin, H Xu, MØ Jensen, E Arbely, ER Bennett, KJ Bowers, E Chow, ... Science 317 (5839), 799-803, 2007 | 181 | 2007 |
| AMBER 12 University of California DA Case, TA Darden, TE Cheatham, CL Simmerling, J Wang, RE Duke, ... San Francisco 1 (3), 2012 | 180 | 2012 |
| Fully flexible low-mode docking: application to induced fit in HIV integrase GM Keserû, I Kolossváry Journal of the American Chemical Society 123 (50), 12708-12709, 2001 | 126 | 2001 |
| A common, avoidable source of error in molecular dynamics integrators RA Lippert, KJ Bowers, RO Dror, MP Eastwood, BA Gregersen, JL Klepeis, ... The Journal of chemical physics 126 (4), 2007 | 120 | 2007 |
| Comprehensive conformational analysis of the four-to twelve-membered ring cycloalkanes: identification of the complete set of interconversion pathways on the MM2 potential … I Kolossvary, WC Guida Journal of the American Chemical Society 115 (6), 2107-2119, 1993 | 118 | 1993 |
| AMBER, version 10 DA Case, TA Darden, TE Cheatham III, CL Simmerling, J Wang, RE Duke, ... University of California, San Francisco, CA, 2008 | 113 | 2008 |
| AMBER 14. 2014 DA Case, V Babin, J Berryman, RM Betz, Q Cai, DS Cerutti, ... University of California, San Francisco, 2014 | 109 | 2014 |
| Proceedings of the 2006 ACM/IEEE Conference on Supercomputing KJ Bowers, E Chow, H Xu, RO Dror, MP Eastwood, BA Gregersen, ... ACM, 2006 | 104 | 2006 |
| Scalable algorithms for molecular dynamics simulations on commodity clusters JB Kevin, C Edmond, X Huafeng, OD Ron, PE Michael, AG Brent, LK John, ... Proceedings of the ACM/IEEE Conference on Supercomputing (SC06), 11-17, 2006 | 99 | 2006 |
| Hessian‐free low‐mode conformational search for large‐scale protein loop optimization: application to c‐jun N‐terminal kinase JNK3 I Kolossváry, GM Keserü Journal of Computational Chemistry 22 (1), 21-30, 2001 | 95 | 2001 |
