| Engineering the microbiome to prevent adverse events: challenges and opportunities S Khan, R Hauptman, L Kelly Annual review of pharmacology and toxicology 61 (1), 159-179, 2021 | 26 | 2021 |
| Multiclass disease classification from microbial whole-community metagenomes S Khan, L Kelly Pacific symposium on biocomputing 2020, 55-66, 2019 | 21 | 2019 |
| Bacterial hydrogen sulfide drives cryptic redox chemistry in gut microbial communities SJ Wolfson, R Hitchings, K Peregrina, Z Cohen, S Khan, T Yilmaz, ... Nature Metabolism 4 (10), 1260-1270, 2022 | 18 | 2022 |
| Longitudinally monitored immune biomarkers predict the timing of COVID-19 outcomes G Lasso, S Khan, SA Allen, M Mariano, C Florez, EP Orner, JA Quiroz, ... PLOS Computational Biology 18 (1), e1009778, 2022 | 15 | 2022 |
| Global regularity of chemotaxis equations with advection S Khan, J Johnson, E Cartee, Y Yao Involve, a Journal of Mathematics 9 (1), 119-131, 2015 | 5 | 2015 |
| Oral Microbes are a Signature of Disease in the Gut S Khan, L Kelly | 3* | 2023 |
| Fireworks: Reproducible Machine Learning and Preprocessing with PyTorch SM Khan, L Kelly Journal of Open Source Software 4 (39), 1478, 2019 | 3 | 2019 |
| Genomic surveillance of SARS-CoV-2 during the first year of the pandemic in the Bronx enabled clinical and epidemiological inference JM Fels, S Khan, R Forster, KA Skalina, S Sirichand, AS Fox, A Bergman, ... Molecular Case Studies 8 (5), a006211, 2022 | 2 | 2022 |
| Microbial cysteine degradation drives cryptic sulfide redox chemistry in the gut S Wolfson, R Hitchings, K Peregrina, Z Cohen, S Khan, T Yilmaz, ... | 2 | 2021 |
