De novo design of protein interactions with learned surface fingerprints P Gainza, S Wehrle, A Van Hall-Beauvais, A Marchand, A Scheck, ... Nature 617 (7959), 176-184, 2023 | 88 | 2023 |
Computational design of novel protein–protein interactions–An overview on methodological approaches and applications A Marchand, AK Van Hall-Beauvais, BE Correia Current Opinion in Structural Biology 74, 102370, 2022 | 42 | 2022 |
Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study H Schweke, Q Xu, G Tauriello, L Pantolini, T Schwede, F Cazals, ... Proteomics 23 (17), 2200323, 2023 | 8 | 2023 |
Rational Design of Chemically Controlled Antibodies and Protein Therapeutics A Marchand, L Bonati, S Shui, L Scheller, P Gainza, S Rosset, ... ACS Chemical Biology 18 (6), 1259–1265, 2023 | 6 | 2023 |
New protein–protein interactions designed by a computer A Marchand, P Gainza Nature, 2023 | 1 | 2023 |
Novel High-Throughput Fluorescence-Based Assay for the Identification of Nematocidal Compounds That Target the Blood-Feeding Pathway A Marchand, JWM Van Bree, AC Taki, M Moyat, G Turcatti, M Chambon, ... Pharmaceuticals 15 (6), 669, 2022 | 1 | 2022 |
Engineering novel protein interactions with therapeutic potential using deep learning-guided surface design A Marchand EPFL, 2024 | | 2024 |
Targeting protein-ligand neosurfaces using a generalizable deep learning approach A Marchand, S Buckley, A Schneuing, M Pacesa, P Gainza, E Elizarova, ... bioRxiv, 2024.03. 25.585721, 2024 | | 2024 |
Systems and methods for de novo design of protein interactions with learned surface fingerprints PG Cirauqui, S Wehrle, A Van Hall-Beauvais, A Marchand, A Scheck, ... US Patent App. 18/206,873, 2023 | | 2023 |
Surface Fingerprinting for the Design of Novel Protein-Protein Interactions A Marchand, P Gainza, S Wehrle, A Van Hall-Beauvais, A Scheck, ... PROTEIN SCIENCE 32 (12), 2023 | | 2023 |
vibbits/Elixir-3DBioInfo-Benchmark-Protein-Interfaces H Schweke, Q Xu, G Tauriello, L Pantolini, T Schwede, F Cazals, ... Github, 2023 | | 2023 |
Machine Learning in Protein Science De Novo Design of Site-Specific Protein Binders Using Surface Fingerprints V Hall-Beauvais, P Gainza, S Wehrle, A Scheck, A Marchand, Z Harteveld, ... Protein Science 32, 2023 | | 2023 |
LPDI S Balharry, L Bonati, J Bonet Martinez, SM Buckley, KM Castro Gilabert, ... | | |