Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ... Nature communications 10 (1), 2674, 2019 | 281 | 2019 |
Modeling protein evolution with several amino acid replacement matrices depending on site rates SQ Le, CC Dang, O Gascuel Molecular biology and evolution 29 (10), 2921-2936, 2012 | 214 | 2012 |
Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open … J Guinney, T Wang, TD Laajala, KK Winner, JC Bare, EC Neto, SA Khan, ... The Lancet Oncology 18 (1), 132-142, 2017 | 161 | 2017 |
FLU, an amino acid substitution model for influenza proteins CC Dang, QS Le, O Gascuel, VS Le BMC evolutionary biology 10 (1), 99, 2010 | 76 | 2010 |
QMaker: Fast and accurate method to estimate empirical models of protein evolution BQ Minh, CC Dang, LS Vinh, R Lanfear Systematic Biology 70 (5), 1046-1060, 2021 | 59 | 2021 |
Improved mitochondrial amino acid substitution models for metazoan evolutionary studies VS Le, CC Dang, QS Le BMC Evolutionary Biology 17, 1-13, 2017 | 32 | 2017 |
Precision and recall oncology: combining multiple gene mutations for improved identification of drug-sensitive tumours S Naulaerts, CC Dang, PJ Ballester Oncotarget 8 (57), 97025, 2017 | 31 | 2017 |
Systematic assessment of multi-gene predictors of pan-cancer cell line sensitivity to drugs exploiting gene expression data L Nguyen, CC Dang, P Ballester F1000Research 5, 2016 | 30 | 2016 |
How reliable are ligand-centric methods for Target Fishing? A Peón, CC Dang, PJ Ballester Frontiers in chemistry 4, 15, 2016 | 27 | 2016 |
ReplacementMatrix: a web server for maximum-likelihood estimation of amino acid replacement rate matrices CC Dang, V Lefort, VS Le, QS Le, O Gascuel Bioinformatics 27 (19), 2758-2760, 2011 | 23 | 2011 |
FastMG: a simple, fast, and accurate maximum likelihood procedure to estimate amino acid replacement rate matrices from large data sets CC Dang, VS Le, O Gascuel, B Hazes, QS Le BMC bioinformatics 15, 1-10, 2014 | 20 | 2014 |
nQMaker: estimating time non-reversible amino acid substitution models CC Dang, BQ Minh, H McShea, J Masel, JE James, LS Vinh, R Lanfear Systematic Biology, 2022 | 18 | 2022 |
A DREAM Challenge to Build Prediction Models for Short-Term Discontinuation of Docetaxel in Metastatic Castration-Resistant Prostate Cancer F Seyednasrollah, DC Koestler, T Wang, SR Piccolo, R Vega, R Greiner, ... JCO Clinical Cancer Informatics 1, 1-15, 2017 | 18 | 2017 |
Unearthing new genomic markers of drug response by improved measurement of discriminative power CC Dang, A Peon, PJ Ballester BMC Medical Genomics 11 (1), 10, 2018 | 8 | 2018 |
An efficient algorithm for global alignment of protein-protein interaction networks ĐĐ Đông, TN Hà, ĐT Hải, ĐC Cường, HX Huấn Advanced Technologies for Communications (ATC), 2015 International …, 2015 | 7 | 2015 |
Whole genome analysis of a Vietnamese trio DT Hai, N Dai Thanh, PTM Trang, LS Quang, PTT Hang, DC Cuong, ... Journal of biosciences 40 (1), 113-124, 2015 | 7 | 2015 |
A fast and efficient method for estimating amino acid substitution models CC Dang, LS Quang, LS Vinh 2011 Third International Conference on Knowledge and Systems Engineering, 85-91, 2011 | 5 | 2011 |
Influenza-specific Amino Acid Substitution Model DC Cuong, LS Quang, LS Vinh Knowledge and Systems Engineering, 2009. KSE'09. International Conference on …, 2009 | 5 | 2009 |
Building a specific amino acid substitution model for Dengue viruses T Le Kim, CD Cao, VS Le 2018 10th International Conference on Knowledge and Systems Engineering (KSE …, 2018 | 4 | 2018 |
Protein type specific amino acid substitution models for influenza viruses NV Sau, DC Cuong, LS Quang, LS Vinh Proceedings of the 2011 Third International Conference on Knowledge and …, 2011 | 3 | 2011 |