Resonance Raman investigation of the chromophore structure of heliorhodopsins A Otomo, M Mizuno, M Singh, W Shihoya, K Inoue, O Nureki, O Béjà, ... The Journal of Physical Chemistry Letters 9 (22), 6431-6436, 2018 | 39 | 2018 |
Allosteric communication with the retinal chromophore upon ion binding in a light-driven sodium ion-pumping rhodopsin A Otomo, M Mizuno, K Inoue, H Kandori, Y Mizutani Biochemistry 59 (4), 520-529, 2019 | 22 | 2019 |
Resonance Raman determination of chromophore structures of heliorhodopsin photointermediates T Urui, M Mizuno, A Otomo, H Kandori, Y Mizutani The Journal of Physical Chemistry B 125 (26), 7155-7162, 2021 | 10 | 2021 |
A study of the dynamics of the heme pocket and C-helix in CooA upon CO dissociation using time-resolved visible and UV resonance Raman spectroscopy A Otomo, H Ishikawa, M Mizuno, T Kimura, M Kubo, Y Shiro, S Aono, ... The Journal of Physical Chemistry B 120 (32), 7836-7843, 2016 | 9 | 2016 |
Direct observation of stepping rotation of V-ATPase reveals rigid component in coupling between Vo and V1 motors A Otomo, T Iida, Y Okuni, H Ueno, T Murata, R Iino Proceedings of the National Academy of Sciences 119 (42), e2210204119, 2022 | 7 | 2022 |
Sub-Tip-Radius Near-Field Interactions in Nano-FTIR Vibrational Spectroscopy on Single Proteins J Nishida, A Otomo, T Koitaya, A Shiotari, T Minato, R Iino, T Kumagai Nano Letters 24 (3), 836-843, 2024 | 4 | 2024 |
Protein dynamics of a light-driven Na+ pump rhodopsin probed using a tryptophan residue near the retinal chromophore A Otomo, M Mizuno, K Inoue, H Kandori, Y Mizutani Biophysics and Physicobiology 20 (Supplemental), e201016, 2023 | 1 | 2023 |
Direct Observation of Stepping Rotation of V-ATPase Reveals Rigid Coupling between Vo and V1 Motors A Otomo, T Iida, Y Okuni, H Ueno, T Murata, R Iino BioRxiv, 2022.06. 13.494302, 2022 | 1 | 2022 |
Visualizing Single V-ATPase Rotation Using Janus Nanoparticles A Otomo, J Wiemann, S Bhattacharyya, M Yamamoto, Y Yu, R Iino bioRxiv, 2024 | | 2024 |
Unusual Vibrational Coupling of the Schiff Base in the Retinal Chromophore of Sodium Ion-Pumping Rhodopsins T Nakamura, Y Shinozaki, A Otomo, T Urui, M Mizuno, R Abe-Yoshizumi, ... The Journal of Physical Chemistry B 128 (32), 7813-7821, 2024 | | 2024 |
Mechanism-based design of DNA-nanoparticle motor with high speed and processivity comparable to motor proteins T Harashima, A Otomo, R Iino bioRxiv, 2024.05. 23.595615, 2024 | | 2024 |
Sub-tip-radius near-field interactions in nano-FTIR vibrational spectroscopy on single protein particles J Nishida, A Otomo, R Iino, T Kumagai Enhanced Spectroscopies and Nanoimaging 2023 12654, 1265403, 2023 | | 2023 |
Tackle “Molecular Engine” by early-career researchers A Otomo, T Kosugi Biophysics and Physicobiology 19, e190039, 2022 | | 2022 |
Chromophore structure in a long-lived intermediate of heliorhodopsins: switching of a hydrogen bonding partner of protonated Schiff base T Urui, A Otomo, M Mizuno, H Kandori, Y Mizutani | | 2020 |
Structural changes in the heme and heme pocket upon CO dissociation of CooA observed by time-resolved resonance Raman spectroscopy A Otomo, H Ishikawa, M Mizuno, Y Mizutani, S Aono JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 19, S287-S287, 2014 | | 2014 |
2P099 時間分解共鳴ラマン分光法を用いた CO 解離に伴う CooA のタンパク質ダイナミクスの研究 (02. ヘム蛋白質, ポスター, 日本生物物理学会年会第 51 回 (2013 年度)) A Otomo, H Ishikawa, M Mizuno, S Aono, Y Mizutani 生物物理 53 (supplement1-2), S175, 2013 | | 2013 |
A comparison of the structures in two functional conditions of Krokinobacter rhodopsin 2 A Otomo, M Mizuno, K Inoue, H Kandori, Y Mizutani | | |