A model for random sampling and estimation of relative protein abundance in shotgun proteomics H Liu, RG Sadygov, JR Yates Analytical chemistry 76 (14), 4193-4201, 2004 | 3038 | 2004 |
Shotgun identification of protein modifications from protein complexes and lens tissue MJ MacCoss, WH McDonald, A Saraf, R Sadygov, JM Clark, JJ Tasto, ... Proceedings of the National Academy of Sciences 99 (12), 7900-7905, 2002 | 735 | 2002 |
Large-scale database searching using tandem mass spectra: looking up the answer in the back of the book RG Sadygov, D Cociorva, JR Yates III Nature methods 1 (3), 195-202, 2004 | 551 | 2004 |
MS1, MS2, and SQT—three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications WH McDonald, DL Tabb, RG Sadygov, MJ MacCoss, J Venable, ... Rapid Communications in Mass Spectrometry 18 (18), 2162-2168, 2004 | 394 | 2004 |
A correlation algorithm for the automated quantitative analysis of shotgun proteomics data MJ MacCoss, CC Wu, H Liu, R Sadygov, JR Yates Analytical chemistry 75 (24), 6912-6921, 2003 | 325 | 2003 |
A hypergeometric probability model for protein identification and validation using tandem mass spectral data and protein sequence databases RG Sadygov, JR Yates Analytical chemistry 75 (15), 3792-3798, 2003 | 259 | 2003 |
Code developments to improve the efficiency of automated MS/MS spectra interpretation RG Sadygov, J Eng, E Durr, A Saraf, H McDonald, MJ MacCoss, JR Yates Journal of proteome research 1 (3), 211-215, 2002 | 244 | 2002 |
Statistical models for protein validation using tandem mass spectral data and protein amino acid sequence databases RG Sadygov, H Liu, JR Yates Analytical chemistry 76 (6), 1664-1671, 2004 | 150 | 2004 |
Cognitive enhancement with rosiglitazone links the hippocampal PPARγ and ERK MAPK signaling pathways LA Denner, J Rodriguez-Rivera, SJ Haidacher, JB Jahrling, JR Carmical, ... Journal of Neuroscience 32 (47), 16725-16735, 2012 | 137 | 2012 |
ChromAlign: A two-step algorithmic procedure for time alignment of three-dimensional LC− MS chromatographic surfaces RG Sadygov, F Martin Maroto, AFR Hühmer Analytical chemistry 78 (24), 8207-8217, 2006 | 114 | 2006 |
On the adiabatic to diabatic states transformation in the presence of a conical intersection: A most diabatic basis from the solution to a Poisson’s equation. I RG Sadygov, DR Yarkony The Journal of chemical physics 109 (1), 20-25, 1998 | 111 | 1998 |
Assessment of cardiac proteome dynamics with heavy water: slower protein synthesis rates in interfibrillar than subsarcolemmal mitochondria T Kasumov, ER Dabkowski, KC Shekar, L Li, RF Ribeiro Jr, K Walsh, ... American Journal of Physiology-Heart and Circulatory Physiology 304 (9 …, 2013 | 83 | 2013 |
Hepatic mitochondrial defects in a nonalcoholic fatty liver disease mouse model are associated with increased degradation of oxidative phosphorylation subunits K Lee, A Haddad, A Osme, C Kim, A Borzou, S Ilchenko, D Allende, ... Molecular & Cellular Proteomics 17 (12), 2371-2386, 2018 | 78 | 2018 |
Measuring protein synthesis using metabolic 2H labeling, high-resolution mass spectrometry, and an algorithm T Kasumov, S Ilchenko, L Li, N Rachdaoui, RG Sadygov, B Willard, ... Analytical biochemistry 412 (1), 47-55, 2011 | 78 | 2011 |
Cognitive enhancing treatment with a PPARγ agonist normalizes dentate granule cell presynaptic function in Tg2576 APP mice MN Nenov, F Laezza, SJ Haidacher, Y Zhao, RG Sadygov, JM Starkey, ... Journal of Neuroscience 34 (3), 1028-1036, 2014 | 72 | 2014 |
Increased serotransferrin and ceruloplasmin turnover in diet-controlled patients with type 2 diabetes M Golizeh, K Lee, S Ilchenko, A Ösme, J Bena, RG Sadygov, SR Kashyap, ... Free Radical Biology and Medicine 113, 461-469, 2017 | 63 | 2017 |
Altered Retinoic Acid Metabolism in Diabetic Mouse Kidney Identified by 18O Isotopic Labeling and 2D Mass Spectrometry JM Starkey, Y Zhao, RG Sadygov, SJ Haidacher, WS LeJeune, N Dey, ... PLoS One 5 (6), e11095, 2010 | 53 | 2010 |
d2ome, software for in vivo protein turnover analysis using heavy water labeling and LC–MS, reveals alterations of hepatic proteome dynamics in a mouse model of NAFLD RG Sadygov, J Avva, M Rahman, K Lee, S Ilchenko, T Kasumov, ... Journal of proteome research 17 (11), 3740-3748, 2018 | 51 | 2018 |
Plasma proteome dynamics: analysis of lipoproteins and acute phase response proteins with 2H2O metabolic labeling L Li, B Willard, N Rachdaoui, JP Kirwan, RG Sadygov, WC Stanley, ... Molecular & Cellular Proteomics 11 (7), M111. 014209-1-M111. 014209-16, 2012 | 48 | 2012 |
PPARgamma agonists rescue increased phosphorylation of FGF14 at S226 in the Tg2576 mouse model of Alzheimer's disease WCJ Hsu, NC Wildburger, SJ Haidacher, MN Nenov, O Folorunso, ... Experimental neurology 295, 1-17, 2017 | 47 | 2017 |