In silico identification of Tretinoin as a SARS-CoV-2 envelope (E) protein ion channel inhibitor D Dey, S Borkotoky, M Banerjee Computers in biology and medicine 127, 104063, 2020 | 58 | 2020 |
Breach: host membrane penetration and entry by nonenveloped viruses CS Kumar, D Dey, S Ghosh, M Banerjee Trends in microbiology 26 (6), 525-537, 2018 | 52 | 2018 |
The effect of amantadine on an ion channel protein from Chikungunya virus D Dey, SI Siddiqui, P Mamidi, S Ghosh, CS Kumar, S Chattopadhyay, ... PLoS neglected tropical diseases 13 (7), e0007548, 2019 | 49 | 2019 |
Non-enveloped virus entry: structural determinants and mechanism of functioning of a viral lytic peptide S Bajaj, D Dey, R Bhukar, M Kumar, M Banerjee Journal of Molecular Biology 428 (17), 3540-3556, 2016 | 26 | 2016 |
Interactions of angiotensin-converting enzyme-2 (ACE2) and SARS-CoV-2 spike receptor-binding domain (RBD): a structural perspective S Borkotoky, D Dey, Z Hazarika Molecular biology reports 50 (3), 2713-2721, 2023 | 23 | 2023 |
The C-terminal region of the non-structural protein 2B from Hepatitis A Virus demonstrates lipid-specific viroporin-like activity A Shukla, D Dey, K Banerjee, A Nain, M Banerjee Scientific Reports 5 (1), 15884, 2015 | 20 | 2015 |
An extended motif in the SARS-CoV-2 spike modulates binding and release of host coatomer in retrograde trafficking D Dey*, S Singh*, S Khan, M Martin, NJ Schnicker, L Gakhar, BG Pierce, ... Communications biology 5 (1), 115, 2022 | 19 | 2022 |
Computational insight into the mechanism of SARS-CoV-2 membrane fusion S Borkotoky, D Dey, M Banerjee Journal of Chemical Information and Modeling 61 (1), 423-431, 2021 | 19 | 2021 |
Structural and biochemical insights into flavivirus proteins D Dey, S Poudyal, A Rehman, SS Hasan Virus Research 296, 198343, 2021 | 15 | 2021 |
Unravelling viral dynamics through molecular dynamics simulations-A brief overview S Borkotoky, D Dey, Z Hazarika, A Joshi, K Tripathi Biophysical Chemistry 291, 106908, 2022 | 11 | 2022 |
Hydrophobicity and oligomerization are essential parameters for membrane penetration activity of the VP4 peptide from Hepatitis A Virus (HAV) P Nair, D Dey, S Borkotoky, A Shukla, M Banerjee Archives of biochemistry and biophysics 678, 108188, 2019 | 6 | 2019 |
Inhibitor-based therapeutics for treatment of viral hepatitis D Dey, M Banerjee Journal of Clinical and Translational Hepatology 4 (3), 248, 2016 | 6 | 2016 |
Structural investigations of the palmitoylated F13 envelope protein of Mpox virus. S Borkotoky*, D Dey* (Equal contribution) Journal of Medical Virology 95 (5), e28798-e28798, 2023 | 3 | 2023 |
A single C-terminal residue controls SARS-CoV-2 spike trafficking and virion assembly D Dey, E Qing, Y He, Y Chen, B Jennings, W Cohn, S Singh, L Gakhar, ... bioRxiv, 2023.03. 09.531992, 2023 | 3 | 2023 |
The Structural Biology of Eastern Equine Encephalitis Virus, an Emerging Viral Threat SS Hasan, D Dey, S Singh, M Martin Pathogens 10 (8), 973, 2021 | 2 | 2021 |
Structure and energetics guide dynamic behaviour in a T= 3 icosahedral virus capsid G Shrivastav, S Borkotoky, D Dey, B Singh, N Malhotra, K Azad, ... Biophysical Chemistry 305, 107152, 2024 | 1 | 2024 |
A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs D Dey, E Qing, Y He, Y Chen, B Jennings, W Cohn, S Singh, L Gakhar, ... Nature communications 14 (1), 8358, 2023 | 1 | 2023 |
Strategies for rapid production of crystallization quality coatomer WD40 domains D Dey, SS Hasan Protein Expression and Purification 212, 106358, 2023 | 1 | 2023 |
Structural Alterations in Non-enveloped Viruses During Disassembly K Azad*, D Dey*, M Banerjee (*Equal contribution) Physical Virology: From the State-of-the-Art Research to the Future of …, 2023 | 1 | 2023 |
Developments in Computer-Aided Drug Design for Antiviral Research D Dey^ (^Corresponding author) Advances in Antiviral Research, 73-91, 2024 | | 2024 |