DNA methylation alterations exhibit intraindividual stability and interindividual heterogeneity in prostate cancer metastases MJ Aryee, W Liu, JC Engelmann, P Nuhn, M Gurel, MC Haffner, D Esopi, ... Science translational medicine 5 (169), 169ra10-169ra10, 2013 | 281 | 2013 |
siPools: highly complex but accurately defined siRNA pools eliminate off-target effects M Hannus, M Beitzinger, JC Engelmann, MT Weickert, R Spang, ... Nucleic acids research 42 (12), 8049-8061, 2014 | 203 | 2014 |
Commonly altered genomic regions in acute myeloid leukemia are enriched for somatic mutations involved in chromatin remodeling and splicing A Dolnik, JC Engelmann, M Scharfenberger-Schmeer, J Mauch, ... Blood 120 (18), e83-e92, 2012 | 178 | 2012 |
Agrobacterium tumefaciens promotes tumor induction by modulating pathogen defense in Arabidopsis thaliana CW Lee, M Efetova, JC Engelmann, R Kramell, C Wasternack, ... The Plant Cell 21 (9), 2948-2962, 2009 | 171 | 2009 |
Germinal center B cell-like (GCB) and activated B cell-like (ABC) type of diffuse large B cell lymphoma (DLBCL): analysis of molecular predictors, signatures, cell cycle state … S Blenk, J Engelmann, M Weniger, J Schultz, M Dittrich, A Rosenwald, ... Cancer informatics 3, 399, 2007 | 150 | 2007 |
An integrated view of gene expression and solute profiles of Arabidopsis tumors: a genome-wide approach R Deeken, JC Engelmann, M Efetova, T Czirjak, T Müller, WM Kaiser, ... The Plant Cell 18 (12), 3617-3634, 2006 | 139 | 2006 |
Prognostic value of genetic alterations in children with first bone marrow relapse of childhood B-cell precursor acute lymphoblastic leukemia. S Krentz, J Hof, A Mendioroz, R Vaggopoulou, P Dörge, C Lottaz, ... Leukemia, doi: 10.1038/leu.2012.155, 2012 | 124 | 2012 |
Early senescence and cell death in Arabidopsis saul1 mutants involves the PAD4-dependent salicylic acid pathway K Vogelmann, G Drechsel, J Bergler, C Subert, K Philippar, J Soll, ... Plant Physiology 159 (4), 1477-1487, 2012 | 106 | 2012 |
Increased expression of c-jun in nonalcoholic fatty liver disease C Dorn, J Engelmann, M Saugspier, A Hartmann, M Müller, R Spang, ... Zeitschrift für Gastroenterologie 51 (01), P_1_14, 0 | 102* | |
Zygotic genome activation occurs shortly after fertilization in maize J Chen, N Strieder, NG Krohn, P Cyprys, S Sprunck, JC Engelmann, ... The Plant Cell 29 (9), 2106-2125, 2017 | 101 | 2017 |
miRA: adaptable novel miRNA identification in plants using small RNA sequencing data M Evers, M Huttner, A Dueck, G Meister, JC Engelmann BMC bioinformatics 16 (1), 1-10, 2015 | 92 | 2015 |
Phosphorylation of Argonaute proteins affects mRNA binding and is essential for microRNA‐guided gene silencing in vivo M Quévillon Huberdeau, DM Zeitler, J Hauptmann, A Bruckmann, ... The EMBO journal 36 (14), 2088-2106, 2017 | 90 | 2017 |
The Crystal Structure of the NHL Domain in Complex with RNA Reveals the Molecular Basis of Drosophila Brain-Tumor-Mediated Gene Regulation I Loedige, L Jakob, T Treiber, D Ray, M Stotz, N Treiber, J Hennig, ... Cell reports 13 (6), 1206-1220, 2015 | 88 | 2015 |
Explorative data analysis of MCL reveals gene expression networks implicated in survival and prognosis supported by explorative CGH analysis S Blenk, JC Engelmann, S Pinkert, M Weniger, J Schultz, A Rosenwald, ... BMC cancer 8 (1), 106, 2008 | 88 | 2008 |
Tardigrade workbench: comparing stress-related proteins, sequence-similar and functional protein clusters as well as RNA elements in tardigrades F Förster, C Liang, A Shkumatov, D Beisser, J Engelmann, M Schnölzer, ... BMC genomics 10 (1), 469, 2009 | 80 | 2009 |
Microbial communities on plastic polymers in the Mediterranean Sea A Vaksmaa, K Knittel, A Abdala Asbun, M Goudriaan, A Ellrott, HJ Witte, ... Frontiers in microbiology 12, 1021, 2021 | 79 | 2021 |
Methane oxidation in anoxic lake water stimulated by nitrate and sulfate addition S van Grinsven, JS Sinninghe Damsté, A Abdala Asbun, JC Engelmann, ... Environmental microbiology 22 (2), 766-782, 2020 | 60 | 2020 |
Causal Modeling of Cancer-Stromal Communication Identifies PAPPA as a Novel Stroma-Secreted Factor Activating NFκB Signaling in Hepatocellular Carcinoma JC Engelmann, T Amann, B Ott-Rötzer, M Nützel, Y Reinders, J Reinders, ... PLoS computational biology 11 (5), e1004293, 2015 | 54 | 2015 |
Transcriptome Analysis in Tardigrade Species Reveals Specific Molecular Pathways for Stress Adaptations F Förster, D Beisser, MA Grohme, C Liang, B Mali, AM Siegl, ... Bioinformatics and Biology Insights 6, 69, 2012 | 54 | 2012 |
Cooperative STAT/NF-κB signaling regulates lymphoma metabolic reprogramming and aberrant GOT2 expression M Feist, P Schwarzfischer, P Heinrich, X Sun, J Kemper, F von Bonin, ... Nature communications 9 (1), 1514, 2018 | 50 | 2018 |