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Josh D. Neufeld
Josh D. Neufeld
Department of Biology, University of Waterloo
在 uwaterloo.ca 的电子邮件经过验证 - 首页
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引用次数
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A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
22432017
PANDAseq: paired-end assembler for Illumina sequences
AP Masella, AK Bartram, JM Truszkowski, DG Brown, JD Neufeld
BMC Bioinformatics 13 (1), 31, 2012
22302012
Ecology and exploration of the rare biosphere
MDJ Lynch, JD Neufeld
Nature Reviews Microbiology 13 (4), 217-229, 2015
10292015
Generation of multimillion-sequence 16S rRNA gene libraries from complex microbial communities by assembling paired-end Illumina reads
AK Bartram, MDJ Lynch, JC Stearns, G Moreno-Hagelsieb, JD Neufeld
Applied and Environmental Microbiology 77 (11), 3846-3852, 2011
9632011
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ...
Nature Biotechnology 29 (5), 415-420, 2011
7242011
DNA stable-isotope probing
JD Neufeld, J Vohra, MG Dumont, T Lueders, M Manefield, MW Friedrich, ...
Nature Protocols 2 (4), 860-866, 2007
5282007
Transplantation of fecal microbiota from patients with irritable bowel syndrome alters gut function and behavior in recipient mice
G De Palma, MDJ Lynch, J Lu, VT Dang, Y Deng, J Jury, G Umeh, ...
Science Translational Medicine 9 (379), eaaf6397, 2017
5192017
Bacterial biogeography of the human digestive tract
JC Stearns, MDJ Lynch, DB Senadheera, HC Tenenbaum, MB Goldberg, ...
Scientific Reports 1, 170, 2011
4632011
Who eats what, where and when? Isotope-labelling experiments are coming of age
JD Neufeld, M Wagner, JC Murrell
The ISME Journal 1 (2), 103-110, 2007
2842007
Methodological considerations for the use of stable isotope probing in microbial ecology
JD Neufeld, MG Dumont, J Vohra, JC Murrell
Microbial Ecology 53 (3), 435-442, 2007
2752007
Evaluating bias of Illumina-based bacterial 16S rRNA gene profiles
K Kennedy, MW Hall, MDJ Lynch, G Moreno-Hagelsieb, JD Neufeld
Applied and Environmental Microbiology, 2014
2732014
Something from (almost) nothing: the impact of multiple displacement amplification on microbial ecology
EK Binga, RS Lasken, JD Neufeld
The ISME Journal 2 (3), 233-241, 2008
2322008
Comprehensive skin microbiome analysis reveals the uniqueness of human skin and evidence for phylosymbiosis within the class Mammalia
AA Ross, KM Müller, JS Weese, JD Neufeld
Proceedings of the National Academy of Sciences 115 (25), E5786-E5795, 2018
2202018
Stable-isotope probing implicates Methylophaga spp and novel Gammaproteobacteria in marine methanol and methylamine metabolism
JD Neufeld, H Schäfer, MJ Cox, R Boden, IR McDonald, JC Murrell
The ISME Journal 1 (6), 480-491, 2007
2062007
Biogeography of anaerobic ammonia-oxidizing (anammox) bacteria
P Sonthiphand, MW Hall, JD Neufeld
Frontiers in Microbiology 5, 399, 2014
2022014
Denaturing gradient gel electrophoresis (DGGE) for microbial community analysis
SJ Green, MB Leigh, JD Neufeld
Hydrocarbon and Lipid Microbiology Protocols: Microbial Quantitation …, 2017
1962017
Inter-personal diversity and temporal dynamics of dental, tongue, and salivary microbiota in the healthy oral cavity
MW Hall, N Singh, KF Ng, DK Lam, MB Goldberg, HC Tenenbaum, ...
NPJ Biofilms and Microbiomes 3 (1), 2, 2017
1912017
Exploring links between pH and bacterial community composition in soils from the Craibstone Experimental Farm
AK Bartram, X Jiang, MDJ Lynch, AP Masella, GW Nicol, J Dushoff, ...
FEMS Microbiology Ecology 87 (2), 403-415, 2014
1882014
Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system
LA Sauder, M Albertsen, K Engel, J Schwarz, PH Nielsen, M Wagner, ...
The ISME Journal 11 (5), 1142, 2017
1872017
The skin microbiome of vertebrates
AA Ross, A Rodrigues Hoffmann, JD Neufeld
Microbiome 7 (1), 79, 2019
1852019
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