Uncovering the complexity of transcriptomes with RNA‐Seq V Costa, C Angelini, I De Feis, A Ciccodicola BioMed Research International 2010 (1), 853916, 2010 | 592 | 2010 |
The rhizosphere-competent entomopathogen Metarhizium anisopliae expresses a specific subset of genes in plant root exudate M Pava-Ripoll, C Angelini, W Fang, S Wang, FJ Posada, R St Leger Microbiology 157 (1), 47-55, 2011 | 105 | 2011 |
L-Proline induces a mesenchymal-like invasive program in embryonic stem cells by remodeling H3K9 and H3K36 methylation S Comes, M Gagliardi, N Laprano, A Fico, A Cimmino, A Palamidessi, ... Stem cell reports 1 (4), 307-321, 2013 | 99 | 2013 |
Testing in mixed-effects FANOVA models F Abramovich, C Angelini Journal of statistical planning and inference 136 (12), 4326-4348, 2006 | 94 | 2006 |
Understanding gene regulatory mechanisms by integrating ChIP-seq and RNA-seq data: statistical solutions to biological problems C Angelini, V Costa Frontiers in cell and developmental biology 2, 51, 2014 | 84 | 2014 |
Massive-scale RNA-Seq analysis of non ribosomal transcriptome in human trisomy 21 V Costa, C Angelini, L D'Apice, M Mutarelli, A Casamassimi, L Sommese, ... PloS one 6 (4), e18493, 2011 | 81 | 2011 |
Rebalancing gene haploinsufficiency in vivo by targeting chromatin FG Fulcoli, M Franzese, X Liu, Z Zhang, C Angelini, A Baldini Nature communications 7 (1), 11688, 2016 | 73 | 2016 |
Benchmark and parameter sensitivity analysis of single-cell RNA sequencing clustering methods M Krzak, Y Raykov, A Boukouvalas, L Cutillo, C Angelini Frontiers in genetics 10, 1253, 2019 | 71 | 2019 |
BATS: a Bayesian user-friendly software for analyzing time series microarray experiments C Angelini, L Cutillo, D De Canditiis, M Mutarelli, M Pensky BMC bioinformatics 9, 1-13, 2008 | 70 | 2008 |
An atlas of gene expression and gene co-regulation in the human retina M Pinelli, A Carissimo, L Cutillo, CH Lai, M Mutarelli, MN Moretti, ... Nucleic acids research 44 (12), 5773-5784, 2016 | 69 | 2016 |
ZFP57 maintains the parent-of-origin-specific expression of the imprinted genes and differentially affects non-imprinted targets in mouse embryonic stem cells V Riso, M Cammisa, H Kukreja, Z Anvar, G Verde, A Sparago, B Acurzio, ... Nucleic acids research 44 (17), 8165-8178, 2016 | 68 | 2016 |
Cripto is essential to capture mouse epiblast stem cell and human embryonic stem cell pluripotency A Fiorenzano, E Pascale, C d'Aniello, D Acampora, C Bassalert, F Russo, ... Nature communications 7 (1), 12589, 2016 | 67 | 2016 |
ZFP57 recognizes multiple and closely spaced sequence motif variants to maintain repressive epigenetic marks in mouse embryonic stem cells Z Anvar, M Cammisa, V Riso, I Baglivo, H Kukreja, A Sparago, M Girardot, ... Nucleic acids research 44 (3), 1118-1132, 2016 | 58 | 2016 |
A Bayesian approach to estimation and testing in time-course microarray experiments C Angelini, D De Canditiis, M Mutarelli, M Pensky Statistical Applications in Genetics and Molecular Biology 6 (1), 2007 | 56 | 2007 |
ICF-specific DNMT3B dysfunction interferes with intragenic regulation of mRNA transcription and alternative splicing S Gatto, M Gagliardi, M Franzese, S Leppert, M Papa, M Cammisa, ... Nucleic acids research 45 (10), 5739-5756, 2017 | 53 | 2017 |
Bacterial IAA-delivery into medicago root nodules triggers a balanced stimulation of C and N metabolism leading to a biomass increase R Defez, A Andreozzi, S Romano, G Pocsfalvi, I Fiume, R Esposito, ... Microorganisms 7 (10), 403, 2019 | 51 | 2019 |
Wavelet regression estimation in nonparametric mixed effect models C Angelini, D De Canditiis, F Leblanc Journal of Multivariate Analysis 85 (2), 267-291, 2003 | 51 | 2003 |
Regression analysis C Angelini Academic Press, 2019 | 50 | 2019 |
Vitamin C and l-proline antagonistic effects capture alternative states in the pluripotency continuum C D'Aniello, E Habibi, F Cermola, D Paris, F Russo, A Fiorenzano, ... Stem Cell Reports 8 (1), 1-10, 2017 | 50 | 2017 |
RNASeqGUI: A GUI for analysing RNA-Seq data F Russo, C Angelini Bioinformatics, 2014 | 48 | 2014 |