| Modeling leaderless transcription and atypical genes results in more accurate gene prediction in prokaryotes A Lomsadze, K Gemayel, S Tang, M Borodovsky Genome research 28 (7), 1079-1089, 2018 | 165 | 2018 |
| MetaGeneMark-2: improved gene prediction in metagenomes K Gemayel, A Lomsadze, M Borodovsky BioRxiv, 2022.07. 25.500264, 2022 | 9 | 2022 |
| Improved prokaryotic gene prediction yields insights into transcription and translation mechanisms on whole genome scale A Lomsadze, K Gemayel, S Tang, M Borodovsky BioRxiv, 193490, 2017 | 6 | 2017 |
| Factoring sparse bivariate polynomials using the priority queue FKA Salem, K El-Harake, K Gemayel Computer Algebra in Scientific Computing: 16th International Workshop, CASC …, 2014 | 3 | 2014 |
| Cache oblivious sparse polynomial factoring using the funnel heap FK Abu Salem, K El-Harake, K Gemayel Proceedings of the 2015 International Workshop on Parallel Symbolic …, 2015 | 2 | 2015 |
| StartLink and StartLink+: Prediction of Gene Starts in Prokaryotic Genomes K Gemayel, A Lomsadze, M Borodovsky Frontiers in Bioinformatics 1, 704157, 2021 | 1 | 2021 |
| StartLink+: Prediction of Gene Starts in Prokaryotic Genomes by an Algorithm Integrating Independent Sources of Evidence K Gemayel, A Lomsadze, M Borodovsky bioRxiv, 2020.10. 25.352625, 2020 | 1 | 2020 |
| Prokaryotic Gene Start Prediction: Algorithms for Genomes and Metagenomes K Gemayel Georgia Institute of Technology, 2020 | | 2020 |
| Improved Computational Tools for Genome Annotation M Borodovsky, A Lomsadze, K Gemayel, K Hoff, M Stanke Plant and Animal Genome XXVI Conference (January 13-17, 2018), 2018 | | 2018 |
| Efficient sparse polynomial factoring using the Funnel heap FKA Salem, K El-Harake, K Gemayel arXiv preprint arXiv:1612.05403, 2016 | | 2016 |
