Multiple peptide conformations give rise to similar binding affinities: molecular simulations of p53-MDM2 SG Dastidar, DP Lane, CS Verma Journal of the American Chemical Society 130 (41), 13514-13515, 2008 | 101 | 2008 |
Structure, dynamics, and energetics of water at the surface of a small globular protein: a molecular dynamics simulation SG Dastidar, C Mukhopadhyay Physical Review E 68 (2), 021921, 2003 | 75 | 2003 |
HKT1; 5 transporter gene expression and association of amino acid substitutions with salt tolerance across rice genotypes MUS Shohan, S Sinha, FH Nabila, SG Dastidar, ZI Seraj Frontiers in Plant Science 10, 1420, 2019 | 52 | 2019 |
Modulation of p53 binding to MDM2: computational studies reveal important roles of Tyr100 SG Dastidar, DP Lane, CS Verma BMC bioinformatics 10, 1-11, 2009 | 43 | 2009 |
Chemical states of the N-terminal “lid” of MDM2 regulate p53 binding: Simulations reveal complexities of modulation SG Dastidar, D Raghunathan, J Nicholson, TR Hupp, DP Lane, CS Verma Cell Cycle 10 (1), 82-89, 2011 | 38 | 2011 |
Discrimination of ligands with different flexibilities resulting from the plasticity of the binding site in tubulin S Chakraborti, D Chakravarty, S Gupta, BP Chatterji, G Dhar, A Poddar, ... Biochemistry 51 (36), 7138-7148, 2012 | 34 | 2012 |
Rational design and biophysical characterization of thioredoxin-based aptamers: insights into peptide grafting CJ Brown, SG Dastidar, HY See, DW Coomber, M Ortiz-Lombardía, ... Journal of molecular biology 395 (4), 871-883, 2010 | 34 | 2010 |
Molecular dynamics simulations of Aβ fibril interactions with β-sheet breaker peptides NJ Bruce, D Chen, SG Dastidar, GE Marks, CH Schein, RA Bryce Peptides 31 (11), 2100-2108, 2010 | 31 | 2010 |
Effect of structural parameters of peptides on dimer formation and highly oxidized side products in the oxidation of thiols of linear analogues of human β‐defensin 3 by DMSO S Liu, L Zhou, L Chen, SG Dastidar, C Verma, J Li, D Tan, R Beuerman Journal of peptide science: an official publication of the European Peptide …, 2009 | 30 | 2009 |
Cholesterol modulates membrane properties and the interaction of gp41 fusion peptide to promote membrane fusion G Meher, S Sinha, GP Pattnaik, S Ghosh Dastidar, H Chakraborty The Journal of Physical Chemistry B 123 (33), 7113-7122, 2019 | 29 | 2019 |
C-terminal substitution of MDM2 interacting peptides modulates binding affinity by distinctive mechanisms CJ Brown, SG Dastidar, ST Quah, A Lim, B Chia, CS Verma PLoS One 6 (8), e24122, 2011 | 28 | 2011 |
Anomalous behavior of water around sodium dodecyl sulphate micelles SG Dastidar, C Mukhopadhyay Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 70 (6 …, 2004 | 27 | 2004 |
Unfolding dynamics of the protein ubiquitin: insight from simulation SG Dastidar, C Mukhopadhyay Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 72 (5 …, 2005 | 23 | 2005 |
Physical interaction between nuclear accumulated CC-NB-ARC-LRR protein and WRKY64 promotes EDS1 dependent Fusarium wilt resistance in chickpea J Chakraborty, P Priya, SG Dastidar, S Das Plant science 276, 111-133, 2018 | 22 | 2018 |
An evolutionary analysis identifies a conserved pentapeptide stretch containing the two essential lysine residues for rice L-myo-inositol 1-phosphate synthase … P Basak, S Maitra-Majee, JK Das, A Mukherjee, S Ghosh Dastidar, ... PloS one 12 (9), e0185351, 2017 | 22 | 2017 |
Role of protein flexibility in the discovery of new drugs G Fuentes, SG Dastidar, A Madhumalar, CS Verma Drug Development Research 72 (1), 26-35, 2011 | 21 | 2011 |
Forces mediating protein–protein interactions: a computational study of p53 “approaching” MDM2 SG Dastidar, A Madhumalar, G Fuentes, DP Lane, CS Verma Theoretical Chemistry Accounts 125, 621-635, 2010 | 21 | 2010 |
Why is F19Ap53 unable to bind MDM2? Simulations suggest crack propagation modulates binding SG Dastidar, DP Lane, CS Verma Cell Cycle 11 (12), 2239-2247, 2012 | 20 | 2012 |
Folding transition-state and denatured-state ensembles of FSD-1 from folding and unfolding simulations H Lei, SG Dastidar, Y Duan The Journal of Physical Chemistry B 110 (43), 22001-22008, 2006 | 20 | 2006 |
New insight to structure-function relationship of GalNAc mediated primary interaction between insecticidal Cry1Ac toxin and HaALP receptor of Helicoverpa armigera A Sengupta, A Sarkar, P Priya, S Ghosh Dastidar, S Das PloS one 8 (10), e78249, 2013 | 18 | 2013 |